XLOC_003227 (CR450813.2)


Basic Information

Item Value
gene id XLOC_003227
gene name CR450813.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 7782514 ~ 7783314 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006367
tccacagaatgccacaaaGGACAcgatcgaatgccttctccaagtccacaaaacacttGAAAGTGTGTACTAgaagggtgtacctaataaagtggccgAAAACTCGAAAGAGCACCAGATTCCCAGCCGTATCCGTTTGGCAATGAGAAACAGTGAATCTAAAACAGCAAATGTTCTCTGCCTCTCAGGATATCAGAATCTAGCAGCCCTTGATCTCGACTGTGGCAGCGTGTGGATTGATGTGGGTAATGTAGTCAAGGCCAGCTGTTAGCAAGAGGAGACGCACTTGTGTCAAACACACTGACCCCCATTTCCAGCCTAATAATGCAGATCCATCCAGCTTCAGCCTGGCCCTGCGCTTGCATATGGAAAAGGTGTCAAACGCTCAGCGGAAAGCCAGTCTGTCCCCGAGGGCTCTGTCGCATGAACTGTGTGTCACCTACATGTCTACCCCTCAAGTGTGATAACAGATCTGTGTATGATCTCGGAATACTGCCGACTCTTTAGCCCTGTAATGATGGCTGTATGACATTTGCTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000097499

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006367 True 538 lncRNA 0.49 2 7782514 7783314

Neighbor

gene id symbol gene type direction distance location
XLOC_003226 adgrl2a coding upstream 44872 7432533 ~ 7737642 (+)
XLOC_003225 diras1a coding upstream 440707 7324704 ~ 7341807 (+)
XLOC_003224 NA coding upstream 496204 7281239 ~ 7286310 (+)
XLOC_003223 si:ch73-238c9.1 coding upstream 502255 7276824 ~ 7280259 (+)
XLOC_003222 reep6 coding upstream 508136 7261981 ~ 7274378 (+)
XLOC_003228 NA coding downstream 42039 7825353 ~ 7826072 (+)
XLOC_003229 NA coding downstream 96828 7880142 ~ 7971030 (+)
XLOC_003230 prkacba coding downstream 346222 8129536 ~ 8150894 (+)
XLOC_003231 samd13 coding downstream 369558 8152872 ~ 8161149 (+)
XLOC_003232 dnase2b coding downstream 387634 8170948 ~ 8179145 (+)
XLOC_003250 BX324177.11 misc downstream 3562489 11345803 ~ 11346099 (+)
XLOC_003255 BX324177.14 misc downstream 3589572 11372886 ~ 11373182 (+)
XLOC_003257 BX324177.13 misc downstream 3603048 11386362 ~ 11386658 (+)
XLOC_003260 BX324177.2 misc downstream 3634719 11418033 ~ 11418323 (+)
XLOC_003262 BX324177.15 misc downstream 3646079 11429393 ~ 11429689 (+)
XLOC_003217 NA non-coding upstream 630507 7149071 ~ 7152007 (+)
XLOC_003218 CU929070.2 non-coding upstream 631608 7150820 ~ 7150906 (+)
XLOC_003216 CR925817.1 non-coding upstream 678978 7095176 ~ 7103536 (+)
XLOC_003215 FQ976909.1 non-coding upstream 826135 6946591 ~ 6956379 (+)
XLOC_003234 CR847563.1 non-coding downstream 794740 8578054 ~ 8580557 (+)
XLOC_003235 NA non-coding downstream 892655 8675969 ~ 8677720 (+)
XLOC_003236 CABZ01079837.1 non-coding downstream 1728219 9511533 ~ 9522073 (+)

Expression


Co-expression Network