G1329620


Basic Information

Item Value
gene id G1329620
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 80011626 ~ 80012894 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1519223
ATTACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCAATACAACAGACCCCATCTCATTACAACAGACCCCCATCTCAATACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCAATACAACAACAGCCTGACACCATTATTGCTCATCC
>TU1519224
accggtctctatagccagactgtcctctctgggcagccaggtttgtctgtgacgaccggtctctatagccagactgtgctcactgagtctgtacctagtcagtgttttcctcagttttctatcagtcacagtggtcagatagtcggCCCCCCGTACTGTCTGTTTAGTGacaaatagcattgaagtttacttaGATTTTTTGTGGGGTATatgtgatatatttttatttctgttttcaatctctctctctctcatctcagacCCCATCTCATTACAACAGACCCCCATCTCATTACAACAACAGACCCCCATCTCATTACAACAACAGACCCCGATCTCATTACAACAGACCCCCATCTCATTACAACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCATTACAACAGACCCCCATTTCATTACAACAGACCCCATCTCAATACAACAGACCCCCATCTCATTACAACAGACCCCATCTCAATACAACAGACCCCCATCTCATTACAACAGACCCACATCTCATTACAACAGACCCCCATCTCATTACAACAGACCCCATCTCAATACAACAGACCCCATCTCATTACAACAGACCCCCATCTCAATACAACAGACCCCATCTCATTACAACAGACCCCCATCTCAATACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCATTACAACAGACCCCCATCTCAATACAACAACAGCCTGACACCATTATTGCTCATCC

Function

NR:

description
PREDICTED: zinc finger protein 595-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1519223 False 224 lncRNA 0.46 2 80011626 80011958
TU1519224 True 772 lncRNA 0.46 4 80011626 80012894

Neighbor

gene id symbol gene type direction distance location
LOC118938877 LOC106594098 coding downstream 316157 79691618 ~ 79695469 (-)
LOC118938876 NA coding downstream 320321 79667754 ~ 79691305 (-)
LOC110513674 LOC106593057 coding downstream 388200 79618502 ~ 79623426 (-)
LOC118938874 NA coding downstream 398755 79609180 ~ 79612871 (-)
LOC110536863 LOC105029310 coding downstream 522498 79487003 ~ 79489128 (-)
LOC110510850 NA coding upstream 122060 80133088 ~ 80139431 (-)
LOC110510397 LOC106596262 coding upstream 138123 80151017 ~ 80231658 (-)
LOC118938879 LOC106591974 coding upstream 139209 80152103 ~ 80153698 (-)
LOC118938880 NA coding upstream 210127 80223008 ~ 80224268 (-)
LOC118938881 LOC106593769 coding upstream 222236 80235130 ~ 80241078 (-)
G1329612 NA non-coding downstream 10854 80000561 ~ 80000772 (-)
G1329611 NA non-coding downstream 12288 79999051 ~ 79999338 (-)
G1329607 NA non-coding downstream 22040 79989204 ~ 79989586 (-)
G1329606 NA non-coding downstream 22554 79988771 ~ 79989072 (-)
G1329605 NA non-coding downstream 22986 79988396 ~ 79988640 (-)
G1329630 NA non-coding upstream 30323 80043217 ~ 80044357 (-)
G1329615 NA non-coding upstream 82965 80095859 ~ 80096506 (-)
G1329663 NA non-coding upstream 95242 80108136 ~ 80108571 (-)
G1329665 NA non-coding upstream 95738 80108632 ~ 80108943 (-)
G1329765 NA non-coding upstream 112890 80125784 ~ 80126311 (-)
LOC110510401 LOC106592932 other downstream 54517 79910682 ~ 80084406 (-)
G1329577 NA other downstream 131266 79879408 ~ 79880360 (-)
G1329481 NA other downstream 443654 79567334 ~ 79567972 (-)
G1329475 NA other downstream 468473 79542794 ~ 79543153 (-)
LOC110517959 LOC106593769 other upstream 244653 80242189 ~ 80268839 (-)
LOC110516867 LOC106594631 other upstream 292407 80286961 ~ 80347887 (-)
G1329752 NA other upstream 335367 80348261 ~ 80354313 (-)

Expression


Co-expression Network