XLOC_032271


Basic Information

Item Value
gene id XLOC_032271
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 42604241 ~ 42610935 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00063020
ATCATGCTCAACTCTTAATATTCTTTTACGCACTTTGAGAGTGTTTGCGTTATTTCAGAGAGATATTTAAGCACATATGAAGTAACAGTGCCGTCTGTGTACTATAGCTACACAATGCAGCATTTAGCTCGCTCGTAAATATCGCTGCTGTCCTCAGATCATTGTCTGAGCAGAAGTTTCATCATAAGCCATGACTGTCAGATGCTCTTCATCTCAGGAGCTGTATTTTTATATGCTTGATAACAGATATAAGCGAGAAGAGGCTGAATCCAAAGCCCGAGAAGAAGCAGAGAAACAGAGGATCGAACGAGAGAAACACTTCCAGAAGGAGGAGCTGGAACGCTTGGAAAGAAAGAAGcgTCTGGAAGAAATCATGAAGAGGACTCGTAAGAGTGACGCAGGAGCAcaggagagatgtTAATACAGAAAAATCCGTCAGAAGCTCTTCATACTGGTGCGACAAACCAATCACCAATGAGCTCTGTGTCCTGGGACGCAGCACCGGTCATTAACGGAGCTCCGCccactaagcatcagaatggacTGTCCTCCAATGGAGACGCTGCAGACTTTGAGGAGATAATCAAGCTGTCCAATCACAGTGGGAACAGTGGGCAGAGTCAACCGGCTGACGACCCAATCATGGCCTTCGAGGGAGGAGAACCGTTCATGATGAAGGCGAGGCCTATGAAACCTCAACATGTGGCAGAGGTGCTGTGAGAGATGAGATATCAGAGTCTTCTGGATATGAAGAGAAGAAGAGAAGCCTTACTCTACCACCGCTTCCACCCTGATGTGTGCCAAACCAACAAAAACTGctttaacaacaaacaaactgCTTTTAACAACAAAGACTGCTTTAACTTTAGAAACACAGCCAAGCCGGACGCGCTCAGGAGAAAGTGCCAGAAGACGAC
>TCONS_00064929
AGAAGCTCTTCATACTGGTGCGACAAACCAATCACCAATGAGAGGTGCTGTGAGAGATGAGATATCAGAGTCTTCTGGATATGAAGAGAAGAAGAGAAGCCTTACTCTACCACCGCTTCCACCCTGATGTGTGCCAAACCAACAAAAACTGctttaacaacaaacaaactgCTTTTAACAACAAAGACTGCTTTAACTTTAGAAACACAGCCAAGCCGGACGCGCTCAGGAGAAAGTGCCAGAAGACGAC

Function

GO:

id name namespace
GO:0032102 negative regulation of response to external stimulus biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00063020 False 917 lncRNA 0.46 6 42604241 42610935
TCONS_00064929 True 250 lncRNA 0.45 2 42608542 42610935

Neighbor

gene id symbol gene type direction distance location
XLOC_032270 camkva coding upstream 5913 42545797 ~ 42598328 (+)
XLOC_032269 mst1ra coding upstream 99234 42475730 ~ 42505007 (+)
XLOC_032268 BX957236.1 coding upstream 220795 42383194 ~ 42383446 (+)
XLOC_032267 gpx1b coding upstream 263022 42338309 ~ 42341219 (+)
XLOC_032266 CU694444.1 coding upstream 441467 42162650 ~ 42162774 (+)
XLOC_032272 BX005129.4 coding downstream 7967 42618902 ~ 42622652 (+)
XLOC_032273 BX005129.5 coding downstream 25025 42635960 ~ 42643033 (+)
XLOC_032274 BX005129.3 coding downstream 35476 42646411 ~ 42653425 (+)
XLOC_032275 NA coding downstream 45778 42656713 ~ 42666008 (+)
XLOC_032276 rbm6 coding downstream 55759 42666694 ~ 42690736 (+)
XLOC_032265 BX664752.1 non-coding upstream 606145 41997963 ~ 41998096 (+)
XLOC_032263 NA non-coding upstream 689228 41896384 ~ 41915013 (+)
XLOC_032261 NA non-coding upstream 815827 41779149 ~ 41788414 (+)
XLOC_032277 NA non-coding downstream 81687 42692622 ~ 42751759 (+)

Expression


Co-expression Network