Gene
RNA
| Item | Value |
|---|---|
| gene id | G1329615 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 80095859 ~ 80096506 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Splicing factor 3A subunit 2, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1519214 | True | 277 | lncRNA | 0.43 | 3 | 80095859 | 80096506 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510401 | LOC106592932 | coding | downstream | 11453 | 79910682 ~ 80084406 (-) |
| LOC118938877 | LOC106594098 | coding | downstream | 400390 | 79691618 ~ 79695469 (-) |
| LOC118938876 | NA | coding | downstream | 404554 | 79667754 ~ 79691305 (-) |
| LOC110513674 | LOC106593057 | coding | downstream | 472433 | 79618502 ~ 79623426 (-) |
| LOC118938874 | NA | coding | downstream | 482988 | 79609180 ~ 79612871 (-) |
| LOC110510850 | NA | coding | upstream | 38448 | 80133088 ~ 80139431 (-) |
| LOC110510397 | LOC106596262 | coding | upstream | 54511 | 80151017 ~ 80231658 (-) |
| LOC118938879 | LOC106591974 | coding | upstream | 55597 | 80152103 ~ 80153698 (-) |
| LOC118938880 | NA | coding | upstream | 126515 | 80223008 ~ 80224268 (-) |
| LOC118938881 | LOC106593769 | coding | upstream | 138624 | 80235130 ~ 80241078 (-) |
| G1329630 | NA | non-coding | downstream | 51502 | 80043217 ~ 80044357 (-) |
| G1329620 | NA | non-coding | downstream | 82965 | 80011626 ~ 80012894 (-) |
| G1329612 | NA | non-coding | downstream | 95087 | 80000561 ~ 80000772 (-) |
| G1329611 | NA | non-coding | downstream | 96521 | 79999051 ~ 79999338 (-) |
| G1329607 | NA | non-coding | downstream | 106273 | 79989204 ~ 79989586 (-) |
| G1329663 | NA | non-coding | upstream | 11630 | 80108136 ~ 80108571 (-) |
| G1329665 | NA | non-coding | upstream | 12126 | 80108632 ~ 80108943 (-) |
| G1329765 | NA | non-coding | upstream | 29278 | 80125784 ~ 80126311 (-) |
| G1329770 | NA | non-coding | upstream | 32823 | 80129329 ~ 80131487 (-) |
| G1329577 | NA | other | downstream | 215499 | 79879408 ~ 79880360 (-) |
| G1329481 | NA | other | downstream | 527887 | 79567334 ~ 79567972 (-) |
| G1329475 | NA | other | downstream | 552706 | 79542794 ~ 79543153 (-) |
| LOC110517959 | LOC106593769 | other | upstream | 161041 | 80242189 ~ 80268839 (-) |
| LOC110516867 | LOC106594631 | other | upstream | 208795 | 80286961 ~ 80347887 (-) |
| G1329752 | NA | other | upstream | 251755 | 80348261 ~ 80354313 (-) |
