Gene
RNA
| Item | Value |
|---|---|
| gene id | G1329770 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 80129329 ~ 80131487 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| nuclear pore complex protein Nup50 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1519455 | True | 257 | lncRNA | 0.42 | 3 | 80129329 | 80131487 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110510401 | LOC106592932 | coding | downstream | 44923 | 79910682 ~ 80084406 (-) |
| LOC118938877 | LOC106594098 | coding | downstream | 433860 | 79691618 ~ 79695469 (-) |
| LOC118938876 | NA | coding | downstream | 438024 | 79667754 ~ 79691305 (-) |
| LOC110513674 | LOC106593057 | coding | downstream | 505903 | 79618502 ~ 79623426 (-) |
| LOC118938874 | NA | coding | downstream | 516458 | 79609180 ~ 79612871 (-) |
| LOC110510850 | NA | coding | upstream | 3467 | 80133088 ~ 80139431 (-) |
| LOC110510397 | LOC106596262 | coding | upstream | 19530 | 80151017 ~ 80231658 (-) |
| LOC118938879 | LOC106591974 | coding | upstream | 20616 | 80152103 ~ 80153698 (-) |
| LOC118938880 | NA | coding | upstream | 91534 | 80223008 ~ 80224268 (-) |
| LOC118938881 | LOC106593769 | coding | upstream | 103643 | 80235130 ~ 80241078 (-) |
| G1329765 | NA | non-coding | downstream | 3018 | 80125784 ~ 80126311 (-) |
| G1329665 | NA | non-coding | downstream | 20386 | 80108632 ~ 80108943 (-) |
| G1329663 | NA | non-coding | downstream | 20758 | 80108136 ~ 80108571 (-) |
| G1329615 | NA | non-coding | downstream | 32823 | 80095859 ~ 80096506 (-) |
| G1329630 | NA | non-coding | downstream | 84972 | 80043217 ~ 80044357 (-) |
| G1329774 | NA | non-coding | upstream | 32913 | 80164400 ~ 80164628 (-) |
| G1329775 | NA | non-coding | upstream | 37695 | 80169182 ~ 80169445 (-) |
| G1329776 | NA | non-coding | upstream | 38920 | 80170407 ~ 80170641 (-) |
| G1329777 | NA | non-coding | upstream | 42917 | 80174404 ~ 80174643 (-) |
| G1329577 | NA | other | downstream | 248969 | 79879408 ~ 79880360 (-) |
| G1329481 | NA | other | downstream | 561357 | 79567334 ~ 79567972 (-) |
| G1329475 | NA | other | downstream | 586176 | 79542794 ~ 79543153 (-) |
| LOC110517959 | LOC106593769 | other | upstream | 126060 | 80242189 ~ 80268839 (-) |
| LOC110516867 | LOC106594631 | other | upstream | 173814 | 80286961 ~ 80347887 (-) |
| G1329752 | NA | other | upstream | 216774 | 80348261 ~ 80354313 (-) |
