G1329780


Basic Information

Item Value
gene id G1329780
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 80222165 ~ 80222618 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1519466
CGGCTGGTTAGCTAGGTGTTGTGGTTGGGGAGACCCTattccaaaccttaaccctaaccataagcAGTCAAAATGaatgccacaaggagtcgctagagcgcgatgcgACAAGGATATCCTggccggtcaaaccctcccctaacctggacgacgctgggccaaacccacccctaacctggacgacgctgggccaaaccctcccctaacctggacgaagctgggccaaacccacccctaacctggacgacgctgggccaaaccctcccctaacccggacgacgctgggacaaaccctcccctaacccggacgacgctgggacaaaccctcccctaacccggacgacgctgggccaaacccttcccttaacccggacgacgctgggccaaaccctcccctgacccggacgacgctggg

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1519466 True 415 lncRNA 0.62 2 80222165 80222618

Neighbor

gene id symbol gene type direction distance location
LOC118938879 LOC106591974 coding downstream 68467 80152103 ~ 80153698 (-)
LOC110510850 NA coding downstream 82734 80133088 ~ 80139431 (-)
LOC110510401 LOC106592932 coding downstream 137759 79910682 ~ 80084406 (-)
LOC118938877 LOC106594098 coding downstream 526696 79691618 ~ 79695469 (-)
LOC118938876 NA coding downstream 530860 79667754 ~ 79691305 (-)
LOC118938880 NA coding upstream 403 80223008 ~ 80224268 (-)
LOC118938881 LOC106593769 coding upstream 12512 80235130 ~ 80241078 (-)
LOC110517959 LOC106593769 coding upstream 19571 80242189 ~ 80268839 (-)
LOC110516867 LOC106594631 coding upstream 64343 80286961 ~ 80347887 (-)
LOC110516866 NA coding upstream 146691 80369309 ~ 80370531 (-)
LOC110510397 LOC106596262 non-coding downstream 8652 80151017 ~ 80231658 (-)
G1329779 NA non-coding downstream 21579 80200332 ~ 80200586 (-)
G1329777 NA non-coding downstream 47522 80174404 ~ 80174643 (-)
G1329776 NA non-coding downstream 51524 80170407 ~ 80170641 (-)
G1329775 NA non-coding downstream 52720 80169182 ~ 80169445 (-)
G1329783 NA non-coding upstream 10005 80232623 ~ 80233095 (-)
G1329754 NA non-coding upstream 12673 80235291 ~ 80243096 (-)
G1329577 NA other downstream 341805 79879408 ~ 79880360 (-)
G1329481 NA other downstream 654193 79567334 ~ 79567972 (-)
G1329752 NA other upstream 125643 80348261 ~ 80354313 (-)
G1329798 NA other upstream 130085 80352703 ~ 80353641 (-)
LOC118936542 LOC106592443 other upstream 147951 80370567 ~ 80391741 (-)

Expression


Co-expression Network