G1330147


Basic Information

Item Value
gene id G1330147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 80964953 ~ 80970599 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1520005
ACCCAATCAGAAAGCAGTATGGAAAAGGGGGTGTGGTTCCTCTTTACCGTACTTCCTGGAAAAAAAGAGACTATAAATATATAGAAAGCTATAAGAAAGCTACCGAGTGTCGTTTTGATTTCAGGTGCATCGGCCCAGTTGTCTTTTCATAGAGCCTGGATGGGGAAAACGAAAGCACCGACACCGAGTTTATAAAAACACAGAGGCGCAACATCTTAAGACTTCCGGGAACGCTTTCGAAGCAGATCAGAACGGAGTTTGAGAAgacctgagccctaggaccatgccccaggactacctgacatgatgactccttgctgtccccagtccacctggctgtgctgctgctccagtttcaactgacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactattctgccttattattattcgaccatgctggtcatttatgaacatttgaacatcttgaccatgttttgttataatctccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaagggctatataaataaatttgatttgatttgaaatttgatttgataacagggctgagcccctccatggaaggaccctatcactaacataacagggctgagcccctccatggaaagagaTCACCCTCTCATATTACAGAGTCCTGCCTTTCTAGGATTCTGTCTTTGCATAACGTATAGagtaattttgcacgtccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1520005 True 984 lncRNA 0.45 3 80964953 80970599

Neighbor

gene id symbol gene type direction distance location
LOC118936542 LOC106592443 coding downstream 573212 80370567 ~ 80391741 (-)
LOC110516866 NA coding downstream 594462 80369309 ~ 80370531 (-)
LOC110516867 LOC106594631 coding downstream 617066 80286961 ~ 80347887 (-)
LOC110517959 LOC106593769 coding downstream 696114 80242189 ~ 80268839 (-)
LOC118938881 LOC106593769 coding downstream 723875 80235130 ~ 80241078 (-)
LOC110515349 crbl2 coding upstream 146597 81117196 ~ 81119754 (-)
LOC118938883 NA coding upstream 227723 81196824 ~ 81199165 (-)
LOC118938884 NA coding upstream 371315 81341914 ~ 81343353 (-)
LOC110517956 LOC106595484 coding upstream 415431 81386030 ~ 81495207 (-)
LOC110511600 gns coding upstream 563523 81534122 ~ 81554017 (-)
G1330143 NA non-coding downstream 5635 80957850 ~ 80959318 (-)
G1330141 NA non-coding downstream 9660 80954799 ~ 80955293 (-)
G1330140 NA non-coding downstream 11392 80952293 ~ 80953561 (-)
G1330123 NA non-coding downstream 55096 80909546 ~ 80909857 (-)
G1330122 NA non-coding downstream 55891 80908804 ~ 80909062 (-)
G1330155 NA non-coding upstream 9853 80980452 ~ 80982314 (-)
G1330157 NA non-coding upstream 17669 80988268 ~ 80989878 (-)
G1330166 NA non-coding upstream 32310 81002909 ~ 81003406 (-)
G1330167 NA non-coding upstream 33735 81004334 ~ 81004779 (-)
G1330175 NA non-coding upstream 55640 81026239 ~ 81026823 (-)
G1330142 NA other downstream 7163 80955531 ~ 80957790 (-)
G1330106 lrp6 other downstream 85550 80878820 ~ 80879403 (-)
G1329894 NA other downstream 412468 80552234 ~ 80552485 (-)
G1329798 NA other downstream 611312 80352703 ~ 80353641 (-)
G1330168 NA other upstream 34273 81004872 ~ 81006072 (-)
G1330352 NA other upstream 279678 81250277 ~ 81251251 (-)

Expression


Co-expression Network