Gene
RNA
| Item | Value |
|---|---|
| gene id | G1330392 |
| gene name | LOC106594571 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 81337635 ~ 81345622 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: epidermal growth factor receptor kinase substrate 8-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1520374 | False | 310 | lncRNA | 0.53 | 4 | 81337635 | 81345622 |
| TU1520375 | True | 254 | lncRNA | 0.52 | 2 | 81337635 | 81339918 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938883 | NA | coding | downstream | 138658 | 81196824 ~ 81199165 (-) |
| LOC110515349 | crbl2 | coding | downstream | 217881 | 81117196 ~ 81119754 (-) |
| LOC118936542 | LOC106592443 | coding | downstream | 945894 | 80370567 ~ 80391741 (-) |
| LOC110516866 | NA | coding | downstream | 967144 | 80369309 ~ 80370531 (-) |
| LOC110516867 | LOC106594631 | coding | downstream | 989748 | 80286961 ~ 80347887 (-) |
| LOC110517956 | LOC106595484 | coding | upstream | 40408 | 81386030 ~ 81495207 (-) |
| LOC110511600 | gns | coding | upstream | 188500 | 81534122 ~ 81554017 (-) |
| G1330393 | LOC106593802 | non-coding | downstream | 3511 | 81330234 ~ 81334124 (-) |
| G1330383 | NA | non-coding | downstream | 28178 | 81309084 ~ 81309457 (-) |
| G1330375 | NA | non-coding | downstream | 41549 | 81295616 ~ 81296086 (-) |
| G1330371 | NA | non-coding | downstream | 51304 | 81285762 ~ 81286331 (-) |
| G1330369 | NA | non-coding | downstream | 52943 | 81284245 ~ 81284692 (-) |
| G1330404 | NA | non-coding | upstream | 16222 | 81361844 ~ 81362046 (-) |
| G1330405 | NA | non-coding | upstream | 16825 | 81362447 ~ 81363126 (-) |
| G1330407 | NA | non-coding | upstream | 28484 | 81374106 ~ 81376965 (-) |
| G1330380 | NA | non-coding | upstream | 33129 | 81378751 ~ 81381054 (-) |
| G1330416 | NA | non-coding | upstream | 51125 | 81396747 ~ 81398070 (-) |
| G1330352 | NA | other | downstream | 86384 | 81250277 ~ 81251251 (-) |
| G1330168 | NA | other | downstream | 331563 | 81004872 ~ 81006072 (-) |
| G1330142 | NA | other | downstream | 379845 | 80955531 ~ 80957790 (-) |
