XLOC_032293


Basic Information

Item Value
gene id XLOC_032293
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007117.7
NCBI id CM002890.2
chromosome length 60270059
location 44721192 ~ 44797559 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00064681
GAAAAACTTAATCATTAAATGTGTCAAAGATTGGCTGCCTGGTTTAATGAaATGCACACAAAGAGTCAGACCTATCAGATCTTCTGTCTGGATGGAGAAACAGAGGTGGCCATTGTATAGAGGGGGAAAAAGCAGGAAagggagcgagagagagaaaaggGGGGAATCCATGCGCCCATTGACTCTGGCTAGTGGGATCCGTATGTTCCCGTCGGAAACAAATGTCATTCTATCACCATCTAGTCATGTCTGACCAATCCTATTTCTCGTAAGGATGACCATTCACTggttctgtgtgcgtgtgtgtgtgtgtgtgtgcgtgtgtgtgtgtgtgttttctattCACATAGATGTGTCTTGTCTTTAAAAAAAGCAGTCATTCACGTTCTCTTTACAAAAGTAGAGTTATATTCCATGGCATTTCTATAACACCTCACCTTTTTACTTGCATTGGGGAGCATTCTGAGGGCTTCATGATAAGATCTGCCATACAACAACAAAAGAACCGCATGCCACTTTATAAATGACAGATTCACAAGAATGGGAAAGCTATCATATTAGAAACTTATAGTCCACATAAATCGAAAGCTgcgaccgttttttttttttttttttttttgtattatgacATAGTTTCTAGAGAACACTATGTCTTGGTTTTTCTACTGGAAGCTGATTGGATTTATTAAAGTAGGCAATTTATTCAGAAAGATCATGAaaagtgtttcaagagttcacacttagctgataattgataataaagcatgtttggcatgctgtcctggg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00064681 True 786 lncRNA 0.39 2 44721192 44797559

Neighbor

gene id symbol gene type direction distance location
XLOC_032291 ppp4r2b coding upstream 511802 44197099 ~ 44209390 (+)
XLOC_032290 gxylt2 coding upstream 527452 44163727 ~ 44193740 (+)
XLOC_032289 BX119974.1 coding upstream 588110 44132968 ~ 44133082 (+)
XLOC_032288 gpr27 coding upstream 813871 43903209 ~ 43907321 (+)
XLOC_032287 NA coding upstream 1119320 43597596 ~ 43601872 (+)
XLOC_032294 chl1b coding downstream 14885 44812444 ~ 44977428 (+)
XLOC_032295 NA coding downstream 190069 44987628 ~ 45083289 (+)
XLOC_032296 BX942846.1 coding downstream 317054 45114613 ~ 45328910 (+)
XLOC_032297 LO017951.1 coding downstream 549249 45346808 ~ 45376758 (+)
XLOC_032298 CABZ01009812.1 coding downstream 557850 45355409 ~ 45355525 (+)
XLOC_032286 NA non-coding upstream 1174204 43498980 ~ 43546988 (+)
XLOC_032282 NA non-coding upstream 1373619 43341943 ~ 43347573 (+)
XLOC_032277 NA non-coding upstream 1969433 42692622 ~ 42751759 (+)
XLOC_032300 LO018004.1 non-coding downstream 807721 45605280 ~ 45605396 (+)
XLOC_032304 BX663614.1 non-coding downstream 1228287 46025846 ~ 46025963 (+)
XLOC_032306 NA non-coding downstream 1512177 46309736 ~ 46320528 (+)

Expression


Co-expression Network