LOC110491206


Basic Information

Item Value
gene id LOC110491206
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 1522256 ~ 1525409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036409.1
cccccccccccacctaccaatctaactaccgttccccccccccacctaccaatctaactaccgttccccccccccacctaccaatctaactaccgtttACTACCGTATTAAACATCCTGCCATTTGACAGGTTGATTAAAGTCAGACAGGTTTATAACCTTTTGCCATATTATCTTTCTCTCAACACTCTGttctattttactattttctgaaTACATACTCAATACTCTAAACAAGTGTGTGCTTTGACATTTAGGAAAAGTGTGGATGTTGTGAACGCGTCTGCATATTTATTCTGTTTTCGGGCTACAGGAACCCTGTGCTTGAGTCCCATCTGTTGATATAGTGTACCACACATCCCTTTCATATACAGACAAATCCCCCTATTTTAACAGCTTTTTATACCAGCTCTTTTGTATATCTGAAAGGGGTagtgggtaaaaaaaaacaaggagAAATAAAACCCACCTAAAGACCTAGTTGCGATTCCTGCATTTTCACAGACCCTGTAACCAACATGCAGGTATCAGGTCTGTGCGAATGCTTCTCTGCTTTTTTTGTAGGTAAATTCATTAACACTTCCATTGTTTAACACCTCCCTAACTTGAAAAGCAACCAGCCCCCATGGTTTAACAACTCCCCACCCCTCCCAGTTTGCCAGTTACCCACTGATCTGTATTAAAGGGGTGTACCTGCAGGAAAGTGGTCAATAAGGGGCTCATATAAACATTACCTTTTCTTTTTTACAGGCAATATACCACGTCTTCTGTCTGAAATGGATAGAATAGATGGAATAGTTGTTTCTCTATAGAGTTCACTATGGACAGCTGTCAACTCTGGGCCAACCCCTCTCATACACACCTGAGCCCCGGTTCACTATGTATGGTTAGACTCAGGTGTAACATCCAACGAGCAGTAATTCTAACCAGGCAACTAAAAATTAAGACACGTTTTAAAGACATTACACAGGATACAGTTATTATACTATATACATATTACATCTCACCCTTACTTACTCCTCATCATATAGGATCttactactggtgtcccccaggacTATGTACTAGGTCCTCTAAtatctcactactggtgtcccccagggctcagtACTAGGTCCTCTTTAATGTCTCattactggtgtcccccagggctcagtACTAGGTCCTCTTTAATGTCTCattactggtgtcccccagggctcagtACTAGGTCCTCTTTAATGTCTCattactggtgtcccccagggctcagtACTAGGTCCTTTTTAATCGATCCTACATCAATCTGATGCCAAACCAGTCTATCCTGCTTTAACTGCAGAACATAAACATTTTGCCCAAAGCTGTCTGATAATATTGAACTTTACTATTTTTGACATAACTTTTCTATGTTTCTTATTCCTTCGTTTTATTATAAAAACCGCTTCATTTGTTTCCTGAGCCTGTTTCTTTTTCCTATCTATTTGTTGCCTGTTGTGTCCTGAGTGAATGGTTGAATGGCAAATTTTTATACCTTACAGCCAACCAACCCAAGGCCTGCATGTTTCTCTCTATGCTCCATCCAGGTCTAGGATTGGTCAATTACGGAAACTTCGCCAGGATTCCAGATTTCCTGCTGATTtcttccaactgggatttctgggaaaaacctgggaattttgggaaggTTACCGGAAATGTCTTACAGTCTCCTCTTTTGCCGACAGGGTTCAAAGTGTTTTAGAGGGTGCGTCCGAAATGGCCCCCTATTTCCtatattagtgcactactttagaccagggctctggtcaaaataagggcactatatagggaatgtgtGCAGAGTgtacagtcagtgtgtgggtcATCAGTGGATGTCGGAGGCCTATTCTCTACGACACTGGCAACCCAAAGGcttttattttgttttcaaaaaaCACAAGGTGTCAAAGTGTTTCCTGTTCGTGGTGGTAGATATCTATTTAGcacatttttacaaaaacaaatacaaaaaatattattggtattattagttgtatttattattattattattattattattattattattattattattgtaataTATCTGTGGCACAGCACTGACGATGACAACATGGTGTGTAGTGCTACTGATTGAGATTGTATGATACTTAGGTTTAAACCATTTATAAAATGTGTGATTGATACTCCTGAGTATTTTTTAACAAAAACTAATATAAGGGTCTGTTTACATGTTATATGATCCCTTTTTATGCTTCAGGTTTCATCTGCTTCAAACACTTTACATTCTGTAAAAAGGTTTCATCTGCTTCAAACACTTTACATTCTGTAAAAAAGGTTATCTGCTTCAAACACTTTACATTCTGTAAAAAAGGTTTCATCTGCTTCAAACACTTTACATTCTGTAAAAAAGGTTTCATCTGCTTCAAACACTTTACATTCTGTAAAATGGTTTCATCTGCTTCAAACACTACATTCTGTAAAAAGGTTCATCTGCTTCAAACACTACATTCTGTAAAAAATCTTTCATCTGCTTCAAACACTACATTCTGTAAAAAATCTTTCATCTGCTTCAAACACTTTACATTCTGTAAAAAGGTTTCATCTGCTTCAAACACTTTACATTCTGTAAAGAATCAAATTAAAATGGTTTTGTTTAGGCTTGCAAAATTCAAATAACTTTTTTCATAATTCTCACGTTTTCCAGAAGTACCGTTGTAAAATGTACAAAAGTAGGAGGGAATAAGCAGCAAATACAGACTTCACAAGGATTTCAGGAAAATCTGGGAATTTTtggaaagttaccagaattttgcaaccctgtcTTTTGTTGTTGTCGTTGTTCTTGGTACTTTACagtagtagcctagtggttcctCATTAGGTATCATGCATCTTTCCTAGCCTgcgtaccagtctgtttgtgccatcctGCCACTCTTTGATACCCAAGCTACACAATTCCTTGAACTGTCCTAGAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036409.1 True 2968 mRNA 0.39 2 1522256 1525409

Neighbor

gene id symbol gene type direction distance location
LOC110491205 gng4 coding upstream 6006 1501444 ~ 1516250 (+)
lyst LOC106578744 coding upstream 31860 1248014 ~ 1490396 (+)
LOC118939493 NA coding upstream 96938 1424306 ~ 1425318 (+)
nid1a LOC106578745 coding upstream 282342 1158437 ~ 1239914 (+)
egln1a NA coding upstream 434881 1041938 ~ 1087375 (+)
b3galnt2 b3galnt2 coding downstream 3689 1529098 ~ 1556109 (+)
LOC118939494 NA coding downstream 31058 1556467 ~ 1558333 (+)
arid4b arid4b coding downstream 86335 1611744 ~ 1825933 (+)
LOC118939496 NA coding downstream 245840 1771249 ~ 1774594 (+)
tomm20a tomm20 coding downstream 306619 1832028 ~ 1838160 (+)
G1331688 NA non-coding upstream 8720 1513170 ~ 1513536 (+)
G1331677 NA non-coding upstream 18448 1503578 ~ 1503808 (+)
G1331676 NA non-coding upstream 18707 1503341 ~ 1503549 (+)
G1331639 NA non-coding upstream 28112 1491795 ~ 1494144 (+)
G1331662 NA non-coding upstream 54373 1466588 ~ 1467883 (+)
G1331690 NA non-coding downstream 1077 1526486 ~ 1526711 (+)
G1331694 NA non-coding downstream 11135 1536544 ~ 1560081 (+)
G1331714 NA non-coding downstream 47962 1573371 ~ 1573968 (+)
G1331734 NA non-coding downstream 74546 1599955 ~ 1600307 (+)
G1331652 NA other upstream 83131 1438787 ~ 1439125 (+)
LOC110491220 NA other upstream 1098982 330164 ~ 425574 (+)
G1330834 NA other upstream 1181180 340076 ~ 341076 (+)
G1330718 NA other upstream 1194032 317523 ~ 328224 (+)
G1330676 NA other upstream 1331461 187717 ~ 190795 (+)
G1332260 NA other downstream 403915 1929324 ~ 1930473 (+)
G1332261 NA other downstream 405345 1930754 ~ 1931132 (+)
heatr5b LOC106578753 other downstream 770447 2295839 ~ 2571759 (+)
LOC110491239 LOC106578780 other downstream 1405811 2931169 ~ 2939940 (+)
G1332701 NA other downstream 1447399 2972808 ~ 2973800 (+)

Expression

LOC110491206 Expression in all Baseline Samples

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LOC110491206 Expression in each Bioproject

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LOC110491206 Expression in each Sample
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Co-expression Network