LOC118939483


Basic Information

Item Value
gene id LOC118939483
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 3686543 ~ 3687093 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036399.1
AGAAGCCTGGAGCAGCGCGTCTGGGCAGGGCCACTAGCATGATCGTCCCACGTAGCCACGCCTTCCATTCTTTATCCAATCAGAGCCCTGACCACGACCAGGAGGAGGACGGATCACCACAACAACGACGAATCACCGTTGCGTCACACATGTCCAAAGACCAGAATGGAAACTTCCCAGAGAAGGTAGAGTAAGACAGCcaatcagaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106591840

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036399.1 True 209 mRNA 0.54 2 3686543 3687093

Neighbor

gene id symbol gene type direction distance location
LOC110492796 slx4ip coding upstream 484817 3065065 ~ 3201726 (+)
LOC110492798 LOC106590888 coding upstream 633055 2989203 ~ 3054026 (+)
memo1 LOC106578779 coding upstream 716937 2945412 ~ 2969606 (+)
trnah-gug-6 NA coding upstream 741483 2944989 ~ 2945060 (+)
LOC110491239 LOC106578780 coding upstream 746603 2931169 ~ 2939940 (+)
LOC118939498 LOC106591840 coding downstream 7505 3694598 ~ 3730931 (+)
btbd3b LOC106578575 coding downstream 179391 3866484 ~ 3902198 (+)
sptlc3 sptlc3 coding downstream 447324 4134417 ~ 4229378 (+)
tasp1 tasp1 coding downstream 557905 4244998 ~ 4337416 (+)
LOC110491218 LOC106578757 coding downstream 953105 4640198 ~ 4973348 (+)
G1333403 NA non-coding upstream 105045 3580806 ~ 3581498 (+)
G1333333 NA non-coding upstream 195568 3489931 ~ 3490975 (+)
G1333324 NA non-coding upstream 224842 3461101 ~ 3461701 (+)
G1333310 NA non-coding upstream 256233 3428000 ~ 3430310 (+)
G1333304 NA non-coding upstream 263161 3422910 ~ 3423382 (+)
G1333464 NA non-coding downstream 10321 3697414 ~ 3699982 (+)
G1333447 NA non-coding downstream 47612 3734705 ~ 3735812 (+)
G1333570 NA non-coding downstream 60149 3747242 ~ 3747512 (+)
G1333574 NA non-coding downstream 63544 3750637 ~ 3751000 (+)
G1333584 NA non-coding downstream 73818 3760911 ~ 3761147 (+)
G1332826 NA other upstream 455136 3230199 ~ 3231407 (+)
G1332701 NA other upstream 712743 2972808 ~ 2973800 (+)
heatr5b LOC106578753 other upstream 1376976 2295839 ~ 2571759 (+)
G1333963 NA other downstream 652745 4339838 ~ 4341823 (+)
G1334530 NA other downstream 1832847 5519940 ~ 5521230 (+)
G1334592 NA other downstream 2016742 5703835 ~ 5704946 (+)
G1335704 NA other downstream 2903883 6590976 ~ 6591915 (+)

Expression


Co-expression Network