trnaa-ugc-125


Basic Information

Item Value
gene id trnaa-ugc-125
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 5105042 ~ 5105117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-125
GTtttatgtggctcagttggtagagcgtggtgcttgcaacgccagggttctgggttcaattcccacggggGGACCA

Function

NR:

description
Deoxyribonuclease gamma precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-125 True 76 mRNA 0.57 1 5105042 5105117

Neighbor

gene id symbol gene type direction distance location
LOC110491219 LOC106578758 coding upstream 126306 4975520 ~ 4978736 (+)
LOC110491218 LOC106578757 coding upstream 131694 4640198 ~ 4973348 (+)
tasp1 tasp1 coding upstream 767626 4244998 ~ 4337416 (+)
sptlc3 sptlc3 coding upstream 875664 4134417 ~ 4229378 (+)
btbd3b LOC106578575 coding upstream 1202844 3866484 ~ 3902198 (+)
LOC110491235 LOC106578800 coding downstream 50773 5155890 ~ 5196581 (+)
LOC110492801 LOC106589958 coding downstream 91577 5196694 ~ 5243823 (+)
LOC110491229 LOC105028001 coding downstream 145193 5245325 ~ 5344475 (+)
LOC110492803 LOC106589963 coding downstream 246434 5351418 ~ 5390024 (+)
LOC110491251 LOC106578785 coding downstream 293422 5398539 ~ 5412634 (+)
G1334349 NA non-coding upstream 592 5103595 ~ 5104450 (+)
G1334333 NA non-coding upstream 42964 5061521 ~ 5062078 (+)
G1334329 NA non-coding upstream 51547 5053196 ~ 5053495 (+)
G1334313 NA non-coding upstream 83415 5020566 ~ 5021627 (+)
G1334305 NA non-coding upstream 110957 4993580 ~ 4994085 (+)
G1334351 NA non-coding downstream 670 5105787 ~ 5106585 (+)
G1334365 NA non-coding downstream 17147 5122264 ~ 5122899 (+)
G1334372 NA non-coding downstream 36378 5141495 ~ 5142386 (+)
G1334407 NA non-coding downstream 114537 5219654 ~ 5220599 (+)
G1333963 NA other upstream 764174 4339838 ~ 4341823 (+)
G1332826 NA other upstream 1873635 3230199 ~ 3231407 (+)
LOC110492796 slx4ip other upstream 1907791 3065065 ~ 3201726 (+)
G1332701 NA other upstream 2131242 2972808 ~ 2973800 (+)
G1334530 NA other downstream 414823 5519940 ~ 5521230 (+)
G1334592 NA other downstream 598718 5703835 ~ 5704946 (+)
G1335704 NA other downstream 1485859 6590976 ~ 6591915 (+)
G1335763 NA other downstream 1659195 6764312 ~ 6768586 (+)
kif20ba LOC106589940 other downstream 1929757 7024970 ~ 7073332 (+)

Expression


Co-expression Network