si:ch211-130h14.4


Basic Information

Item Value
gene id si:ch211-130h14.4
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 6930548 ~ 6970320 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036946058.1
TGTTTTTAAAAGTTTGTAGGTTTAAGTGTTAGCTAACTTAAAAAGATTATCGTGTAATATCCTTTGTGAAATTATTTAAATTGTTGATATTGTGCGAGCTGCTAATAGGTCGGCTGTAGTACCATGTAGAAATAGTGTGTACCTACATTGTAATTACACTAGCGTACTTATAAATGATGAATTATATTGTTATCCCGCCTCAATGTGAAGGTTGACTGTGATTGGATCCCGATGAAGTCAAAGTGTAAAGACATCCACCAATCAAGCAACCTTCCCTGCATCTTGGAAACATACCTGCCATCTAGTGGTGGCAAAACGGCAGAGAATGAAGACAGGCCTCAGCGTTGGAGGAAGAAGCTGACCCAGAGCAGAGAGACTGGGCCTGGGGGTCAGAATCACCCTGGGAGTGCTGCTAGTGACCCAGACAGCGTCAGTCGCCAGGCTCTGCTAGATCAGCGCCATCTAGAGGCGTACAGAAACATGCACCGTCTCAGAGACATCCTGTACCGTCGATACTCTGCCATGCTCAGAGataagatacacacacagagacaggagatACAACGCCGTGCTGCGGCAGCTGGAGTCACCGAGGATAAACACATACCGAAACTGAGGAAGCTGACCTGTTCTACTCTCTCCCATGACAACACATACCTGAGGTCTCTTCCTCAAACCAGCTACTACCTGATCTTGGACCTTCAGAACCAGTTGTCTCGGCATGGTTGTCTGAAGACCCTCCAGGACCAAGAGGACTTCTGTTTTATGgttaaccaccaccaccaccacaaccgtgGTCCAGTCCAGCTGCAGAGAACACTACAGGAGATCAGGAAGAGGATGATTGGCAGCCGCTCCGCACCTGATGTGATGTCAGCGGGATGGGGTTGGAGTCAGCAGGAGATGTCAGTACAGACCCCTAGAATTCACGTCACCACAGAGGCAAGACACCTGGACCGGATTGTCCattcagagacagggagagggctTATGCCGGGAGAGAGACTTCCAGAAAGAGGGGCTGGGAAGAGACTTCCAGAAAGAGGGGCTGGGGAGAGACTTCCAGAAAGAGGGGCTGGGGAGAGACTTCCAGAAAGAGGGGCTGGGAAGAGACTTCCAGAAAGAGGGGCTGGGGAGAACTCTGCAGCCTTCCTCCTCTCACAGCAGGAACAGGACTACACGGAGCAAATGTTTCCCAAGGTGAAGGTTCCCAAGTTTGCAACCCTTCAGCCTAGTTTTCTGAAGAACTTGAAGACGGTGATGCCAActgtgGGAGTTGAGGAGATACCTGAGAAGAGTAAGAGAGCAGAGATGACTGTGAGGATGCTGAGACACATGCACAGCCAGTCCCTTACCAACATGGCTGTCTCTCAGAGactgctactggacagagacagacactcaCTGTGCTGCTGCTGGGAACAGAAGAGGAGTTTCGAAGATTTGACGCAGTATGTATTTCCGAGTGTTCACTCTGacgaagagaagaagaagagatgtGCTGGgaacctccctcctctccttcctcctctccttcctctccctcctcctccgtcCTACCAGGAATGGACCAGGATCGACCCAGATGATTCAGAGGTCCCTAGCCTGGCCCTGGAAGAGCTTGGGCTGAGGACCATACCCTCTGCTGGAAACACAGAAATATGTAGCAAGACTCCTGAGCCTTTATCCATAGAAGATGTGTGTCAACGCAACCCTTCAGGGGTGATACATTGTGGATATAAGCTTTGGAGGAATTATGACGAGGAGACAGCCTATTGAGTATCTTCGTTTGATGTGAAGGCCACTAGGCTACACCAATCACCAATCACCAATACCATGAATGAGATAAAAAGATTATGAGATTATGTATTATTTTGACACCAGTTCACTGAGAGAGCAGTTCACTTAGAGACCAGTTCACAGAGACCAGTTCACTGAGAGACCAGTTCACTGAGAGACCAGTTCACTGAGAGACCAGTTCACTTAGAGACCAGTTCACTTAGAGACCAGTTCACTGAGAGACCAGTTCACTGAGACCAGTTCACTGAGAGACCAGTTCACTGAGACCAGTTCACTGAGAGACCAGTTCACTGAGACCAGTTCACAGAGAGACCAGTTCACTTAGAGACCAGTTCACAGAGAGACCAGTTCACAGAGAGACCAGTTCACAGAGAGACCAGTTCACAGAGAGACCAGTTCACTCTGGATTCCTATTGTGTTTGTCTTCGactatatcaacaacaacaaaacgatATAGATGGTAAAATTTCAAAtgattttacaaataaaatgtattattagcAGTATGTGTTTTATATCAACATTGAGTAAAGAACTAAAGGCAAATAACGAATAGAAAAGCAATTATTTAACTACCAATTCTTTTTTAAGAGAAATATAACCCATGTGTATTTAGAACGACACGTTCTACTCACTCGATTGATTCTGATTGTGAATGATTTAAGCTAATAATAAAACTTGCTAAGAAGTTGATTTTTTGACGCGCCTGTTGCTATGGTTATTGTTTAATCGTTAAGGCCTGGAGTGCATTTCCTGTGTTTTGTCACCTACCTGACTACATCCCAGGACTCAAAAATAACATCTTTATTAATAGGCCTCACCTTTAATCATGGCCTTCGTGGGAAATGGTTTGTAAATGATTTCAGTCAGGACTATTATTGACGAGGAAAagcagaatttaaaaaaaaataatgtggtAAAATATAAACTGCTTTATTGGAGGAAAACGTCCAAGTATGTATTTTGCAgagaaagtttaaaaaaaaaaacaaatataattAAAATATTTCCTGTCTATCTGATTAGAGCTTGAGCATCAGACATAAATGTATTTATGCATTCGACTATAGGTCTGAGTCCTACCCATCAGAACACACAGTCTTCAGTATAGAGCTTAGTAAAACCAGAAAGAAATACCTTAACGTTAAAATCTCAGTTTCTTTCTGCAGGTGTGTCGttgatataggctactgtatgtgtaaaTATGGACAGATTGAAGTAATAAAGCAATTCAGATTGGCTGGTGAGCCATCGACTTCAGACACATTACCCATCCTTCCTAGTCCGACTCATATGGCCGCACTCAACCAATGGCTGACCAGACAGCATACACCAGAGCAAAGAACAGCCAACCAGCGATCATCCAGAACTATCCGGCGATGGACTGATTTAGGAGTAGGCTATATATTTGtgtaccatgtgtatgtgacaaataaaatttgatttgatttgatttgatttggaaactTTCAATCTAATGGAGAAGATTGATATATTCaagaggtacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaattttcatcataggtacactccaACTAc

Function

NR:

description
uncharacterized protein LOC109866062

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036946058.1 True 3410 mRNA 0.44 13 6930548 6970320

Neighbor

gene id symbol gene type direction distance location
LOC110491266 pde10a coding downstream 51624 6771395 ~ 6878924 (-)
LOC110491271 cssa19h6orf118 coding downstream 173434 6738304 ~ 6757114 (-)
pla2g12b LOC106578797 coding downstream 200907 6710844 ~ 6729641 (-)
micu1 micu1 coding downstream 428568 6397252 ~ 6501980 (-)
mrps6 mrps6 coding downstream 570202 6359449 ~ 6360346 (-)
prr18 LOC106578829 coding upstream 2602 6972922 ~ 6974506 (-)
LOC110491283 LOC106578830 coding upstream 5919 6976239 ~ 7020654 (-)
LOC110491286 LOC106578832 coding upstream 141185 7111505 ~ 7115346 (-)
pno1 pno1 coding upstream 264147 7234467 ~ 7238405 (-)
LOC110491297 LOC106578843 coding upstream 341115 7311435 ~ 7316122 (-)
G1336293 NA non-coding downstream 43848 6886055 ~ 6886700 (-)
G1336239 NA non-coding downstream 56535 6870150 ~ 6874013 (-)
G1336287 NA non-coding downstream 62015 6868195 ~ 6868533 (-)
G1336276 NA non-coding downstream 82173 6847954 ~ 6848375 (-)
G1336272 NA non-coding downstream 88922 6840984 ~ 6841626 (-)
G1336343 NA non-coding upstream 10112 6980432 ~ 6983254 (-)
G1336345 NA non-coding upstream 14776 6985096 ~ 6985482 (-)
G1336359 NA non-coding upstream 54779 7025099 ~ 7025640 (-)
G1336379 NA non-coding upstream 94007 7064327 ~ 7064620 (-)
G1336382 NA non-coding upstream 102790 7073110 ~ 7074100 (-)
G1336033 NA other downstream 626817 6303007 ~ 6303731 (-)
G1335308 NA other downstream 1157404 5772733 ~ 5773144 (-)
G1335222 NA other downstream 1277681 5624448 ~ 5652867 (-)
G1335145 NA other downstream 1541165 5387958 ~ 5389383 (-)
LOC110492875 LOC106578856 other upstream 809959 7777876 ~ 7806345 (-)
G1337783 NA other upstream 1442451 8412771 ~ 8413067 (-)
G1338014 NA other upstream 1496888 8467208 ~ 8470144 (-)
LOC110491322 LOC106589467 other upstream 2163295 9133541 ~ 9138698 (-)
G1339219 NA other upstream 2732796 9703116 ~ 9703631 (-)

Expression


Co-expression Network