kif20ba (LOC106589940)


Basic Information

Item Value
gene id kif20ba
gene name LOC106589940
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 7024970 ~ 7073332 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945866.1
aaaaaaaaatccctctcTCCCGATTGGTCGAATTTAAAAATAAGACCGGGACAGTTTgggttgaagaaggatttttgATGCGATCAATATTTTGGGAATCCGTTTTCTCACGATGATGGAATCGTGTTTTTACAACAAATTGGAAAGCGTGGAGCGGGAAGTTAACTTCGACGACTTGAAGAAAGACCTATTTTCTGAGTTTAATTCCATAGACTCCCAGGAGTCTTGTCTGGAAGAGCATGAACACTTGCAGGTGTACCTTCGCATTCGACCATTCACAACAACTGAGAGTGAAAAGGGCGAATCGCAGGACTGCGTTTCCATCGAGCGCCCGGACACGGTCCTCCTTAAGGCTCCAAGGACTTCGCTCTCAGCGCGGCTCCGTGACAAATCGGCTCAACGGTTTCAATTCTCACAGGTCTTAGGGCCAGAAACCACTCAGAGGGAGATGTTTGACAGCACAGTGAGAGGCCTCGTCAAGGAGGTTCTTGAAGGTGGAAATTCTCTCGTTTTCACGTATGGAGTGACCAATGCGGGAAAGACATTCACTTTTCTAGgtCCAGAGGCCAATGGAGGGATCCTCCCCAGGTCTTTGAATGTCATCTTCAACAGCATTGAGGGGCGTGTTTACGACCAGATGACTATCAAGCCACAGCGATGCAGAGAGTTCATCAGGCTCACTAAAGACCAGCAGAGTGAAGAGGCCACTAACAAGAGAAACCTCTTCAGGCTCCTCAAGGAGAGTGATAACCAGAAAAGCTTCACCAAGACAACCCTGGAAGGGTCCACACCGAGTGACATCGAGGGGACTGTGACGGAACAACGTTTCAGTCTGGTTGTTGAAGCACACACCAAGTTCTCCGTCTGGGTGTCCTTCTGTGAAATCTACAACGAGAACATTCACGACCTGCTGGAGTCCGTTCCGATCGGAGCCCAGAAGAGAACCACGCTGCGGCTGTCGCAGGATGTCAAAGGCAACTCCTTTGTGAAAGATCTGAAGTGGATACAGGTGAACAATGCGGAGGAAGCCTACAAGGTAATGAAGCTAGGGAAGAAGAACCAGAGCTTCGCCAGCACAAAGCTCAACCTCCTCTCGAGCCGGAGCCACAGCATATTTTCTGTTCGTATCCTGCGGATGGAAGATGCTAGGATTCCTCGTGTTATCTCGATCAGCGAGCTGTCCTTGTGTGACCTGGCTGGGTCTGAGAGGTGCGCTAAAACTCAGAATAAAGGGGAGCGTTTGAAAGAGGCTGGAAACATCAACACTTCCCTGATGACACTGGGCAAGTGTATCAACACGTTACGGCAAAGCCAGCAATCCAAGCTACCACAGCATGTCCCCTTCAGGGAGAGCAAGCTAACCCACTACCTTCAGGGCTTCTTCTGTGGCCGGGGCAAAGCCTGCATGATAGTCAACGTCAACCAGTGTGCCTCCATGTACGACGAGACGCTCAACGTGCTAAAGTTCTCCGCCGTGGCTCAGAAGGTGGTGGTGCTGACCACCAAGACCGTCCCCCACCTCGCCACCAAAAGGTCGGCCCGGGAACTGTCCATGATCATCAACAACGCAGACAGGAAGTACCTGTTGGGTCAGAAGAGAAGGAGCTCCCTGGTTGGCTGGGAGACCAGTCTGGAGGACGTGCAGGAGCATGACGACacggaagaggaagaggagagcgtGATGGAGACCATGCAGGAAGTGGACGATGATGAAAAGGTTCTCATCAATAAAGACACTTATGAGAGCCAGCTCCTCCAGTTGACGGAGCTCCGGGAACAGCTCCAGAAAGAGAGGTCTGAAAACATTGCTTTGGAATCCCGTATCCGTGACGAGGTCACCAAGGAGTTCTCGGAGTTCTTCTCTGAAATGCAGACCGATTACAAGGAGCGTCTGGCCAAAGAGGAGAAGAATGtcgaggagagagcagagaagcGTCTAGAGATCCTGAGAAATCTTGGGAACATTAACACCAGTCAAGAGGAGTTGGACAGAGTAGAGCGAGCCACAGAGGACAGCTCGCCATTGGGAAAGATGTTTGACTCCATGTGCAGTGACCTGGCGGGCATAAAGAAGGCGGCTTTGGAGGCCAAGACGTGTCTGGTGGTCACCCAACCCAGTGGCGAAACCATCTCCAATCTGGAAAAGAGAGTGGATGATCTCTCGGCGCTGCTGAACCAAGCCCAGGAGCAGCTCACTGTCAAAACCAATGAACTAGAATATTGTTGCAAACAAGCGCGGCAATCGAACGAACAGCTTGAAGAGGCTAGAAAGACTCTTGAGTCTCAGGAGCTGAAATTCTCCTACTTCCTGGAGATGTGTCACGAGAAGGATGAGATGATCACCGCGCTTCAGAACACCGTAGACCAACAGGTCCAAGCCACCATCAAGAATAAGGCTACATTTGACGGCATCAAAAATGAGATCCTGCAACTGAAGAGCAGCTGCTCTTGCTCCAGAGGGGAGAGGCCCAGCTCTCGCGCAGAGAGCCGCAAACGGCTGGTGGACCTCCAGGCCAACCTGGAGGACCAGCCACCCAGCAAGAAAGGTACAGGGTGGGCTCCGAGCACGGCCGGGAAGCCCCTCCCACCGTTTGTTGGGTTGAGAGCAGGGGGTAGAGAGAACACAGCCAAAAGTCGCAGGAACATCCGCTTAAAGAGGCGACTGTCTGCGCTCAAGAACTCATCAAGTCAACATAAAATAAAATCCCCACCATACCTCAGAAGCTTTGCGTCACCTTCAAAGATAATTCAACAAGTGTCCATGTCTTTGTTAGGGttcctggggagaggagaggaggagatggacagATTGCACAGGGAGCTGGTGGAGGTACAAAGGGACAGTGGGCTTCTCAGAGACAAGCTGACGGAACAGAAAAGAGAATTCCCAAAGACCCTAAAGGAGAGTGAGAAAGGGCCAGAAATGGAGGCTAAAGCCATGGACCACAGCGAGAACTCTGTAGCTGAGGTCGTGACCTTGAAGGGAAAGATGGCTGCACTGGAGGAGAAGCAGTGCACCCACCAAACGGAGAGGGAGGCGGTCGTAACCGTGTCCCAGTCGTATAACGACGAGCTCATGTCCCAAACGGAGAGAGTGGCAGAGTTGGAGAAGATGCTGTTTGAGAAGGAGGCGCAGGTGTCAGGCCTGCAGAGGAGCCTGAGGGAGGCGCAGGAAATGCGGGAGGATGAGGAGACCGCTACGGTGCAGGAGGCTCgtaagagggaggtggagaggaggcgGGAGTTGCTGGCTGTGGCTGAAGAGGCCATCACTCAGAAGAACGCtgagctggagaggagagagcgggtCATCACCAGATTGAAGGAGACGGCTAAACTTGACTCCGACAAAGTGAAGAGTTTGAGCCTGGACCTTGAGAGGAAAGACGACCACACTTCTGATCTCAAAGAGAAGCTGTCCGACTCTAAAAAACAGATCCAGCAAGTTCAAATAGAGATCATCTCCATGCGAGAAGAGGCGAAATCTCTCAAACTTAAACTGCAGGACTTGGAGAAAGTGAAGAAACGGCAGCAGGCAGACCTGGCTAATAAAGACAGGACCATACAGCAACTGAAAACGGAACAGTCTGCTGACGAGAACCTCAAGCTCAATCCGAACGCCTGTAAAGACCTTCAGGCTAAGGAGCGTATGATGGAGGACATGCGTCTGGCTCTGATTGAACAGGAGGATACCCAGACCCAACAGGAGCTGGTGTTAGAGGCCAAACTGGATGAGATTGACGCCCTCATTGAAGaggTGGATAAACTGAAAGGACTGTTACGCTACCAAGACAGTGGGAAAGACACTGGAGCCCTGAGAGACAGCCAATCGGACGAGGCCAAGCTAGCCATACAGGAAGCAGTTCAGGCTCAAGTGACCTTGAAGCTGTGTACTGAGAAACACCAAGCTGACAAGAGGAAGTGGCTCGAAGAGAAGACGGTTCTGATCCGGCTGGCCAAGGAGGCCGAGGATAAGAGGAACCAGGAGATGAGGAAGTTTGCAGACGGCCGTAAGCGTCACGCCAAGCAGCAAGACCAAGTGGAAGGTCTGGTGGCCCAGCTCAGTGAGAAGGAGCAGGACCTACTGaagtggaggaaagagagggactcCCTGGTGACAGCTCTGGAGGTCCAGCTAACCAAACTCCTCTCCAGCAACGCAGACAAGGATGAACAGATAGCCAGTCTCCGCTGCCACGCCTCCTCTCAGCCAGCAGAGGGGGACCAAGGCCAGGTGGCGCTACAGGGCCTtctgtctgacagagacactGAGATTCTTAACCTGAAGGAACAACTGAAAACTGCATTCAAAGCCAGCAGCGATGCCTCGGACCCTactaaacacagagagacagccaatCAGCTCTCACAGACTGAAGCAGAGGAGTGCCCTTCCAAAGTCCGTGAGAGGACTCTCCATGACAACGGTCAACTAGTACACGACGTAAAGACGTCGAAGAGGACCAGTCAGgggtcTGGGGGCTACCCGTCGGTGCTAGACTCCTCAGAGATCTCCACAGAAGGAGGCAGGACCAGCCGCTTCCCCAAGCCTGAGCTCGAGATCTCCTTCAGCCCGCTGCAGCCCAACAGGATGGCCCTGAAACGCCAGGGAGAGGACGTAATCAATGTCAAAATCACCCGCAAGAGGAAGAGCTCTGAGATCGACAAGaagAGCGGATGGCGCAGTCCAGCTAAAAGGAGAGCAACGCATGAGCTCCCGTCTCagGATGAGGTGCACAAGGAGAACCATAGAAACCCCAGAACCAGACTGGCTCCTAAACTGGCTGTGCATCAAGAGGTGCCGTCTCCGGCCTGGGGCAGTAAAGACCCGGGATCCATGAGGCCCCAGGACTCCCAGTCCAGCTTGCATAGCAGGAAAGAAGGAACGATGCAGAAGATCGGAGTCTTCGGTAGCAAAGctAAAAAGATAATGGGATTGGTGAGCGGGAAATCCCCAGAGACGGAGTCGTCCATGAGCTTTAGACCCATGAAGTCTAAGTGGAAGCTGTACAGACCAGAGATCTCTTCCGCGATAGACTTCTCCTCCCACCCGATCATCAATGGAGTTCCAGATGAGAAAGAGAGTGACCGTCTCATCGTCAAGAGAGAACTCTGGACCGAAGTCAAAGACGCTGCTCTTTAATGGTACAGGGAAATGAattaatagattttttttttaatgaaggaCATCTTGAAGTTTACTTTATTGTTAAGGCCGTTTTTCTTTCTAGAAGACGTGTATTTTCTGAAgtcacttcctcttcctcttagCTTCCTGTTTTCTTTCATATAGTCTTCATTCTATTGTATTTCTACATATTTACCGTTGCACATATTATGATTATTTCTCTCCATTCTGTATAATATGATTTAACAGAATATAATCAACTATTTTTATTCTCAGTCCAGAACATCATCGTGGTGAAGCAGTAATCTGAAGATTTAGTATAGTACTTTATAAAAACACAGTATAGTACTTTACTGTGATCATCTCAACGATGTTCTTGTAAACACAGTATAGTACTTTATAAAAACACAGTATAGTACTTTATAAAAACACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAACACAGTATAGTACTTTATAAAAACACAGTATGGTACTTTATAAAAACACAGTATAGTACTTTACTGTGATCATCTCAGATGTTCATGTAAAAACACAGTATAGTGCTTTATAAAAACACAGTATATCACCTTACTGTGATCATCTCAGATGTTCTTGTAAACACAGTATAGTACTTTACTGTGATCATCTCAACGATGTTCTTGTAAACACAGTATAGTACTTTATAAAAACACAGTATAGTACTTTATAAAAACACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAACACAGTATAGTGCTTTATAAAAGCACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAACACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAACACAGTATAGTGCTTTATAAAAGCACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAACACAGTATAGTACTTTATAAAAGCACAGTATAGTACCTTATAAAAGCACAGTATAGTACTTTATAAAAGCACAGTATAGTACTTTATAAAAACACAGTATAGTACCTTACTGTGATCATCTCAGATGTTCATGTGGTAAAAAAACATCTGTATGCTGATGACACAATTATTAATTTATGCGTATCTAATATTCAGAAGGCTTTTCAGGACTTACAGTACAGGCTTTTGATGTTATTCAAAGGCAGCTTTTCCAATTGAAACTTAATGCAAGGAAAACAAAAATGCATGGTTTTCTCTTCCCTGAAAGTTAACAGATTGAGTCAACATGCAGATTTTATCTAGAAAATTCCAGCAAATTGATAGGTTCATCTCCTATAAGTATCTTGGGATTTAGTACTTTATTGTGATCATCTCAACAATGTTcatgtattttaaaaaaata
>TU1527336
AGAGGCCATCACTCAGAAGAACGCtgagctggagaggagagagcgggtCATCACCAGATTGAAGGAGACGGCTAAACTTGACTCCGACAAAGTGAAGAGTTTGAGCCTGGACCTTGAGAGGAAAGACGACCACACTTCTGATCTCAAAGAGAAGCTGTCCGACTCTAAAAAACAGATCCAGCAAGTTCAAATAGAGATCATCTCCATGCGAGAAGAGGCGAAATCTCTCAAACTTAAACTGCAGGACTTGGAGAAAGTGAAGAAACGGCAGCAGGCAGACCTGGCTAATAAAGACAGGACCATACAGCAACTGAAAACGTCTGCTGACGAGAACCTCAAGCTCAATCCGAACGCCTGTAAAGACCTTCAGGCTAAGGAGCGTATGATGGAGGACATGCGTCTGGCTCTGATTGAACAGGAGGATACCCAGACCCAACAGGAGCTGGTGTTAGAGGCCAAACTGGATGAGATTGACGCCCTCATTGAAGaggTGGATAAACTGAAAGGACTGTTACGCTACCAAGACAGTGGGAAAGACACTGGAGCCCTGAGAGACAGCCAATCGGACGAGGCCAAGCTAGCCATACAGGAAGCAGTTCAGGCTCAAGTGACCTTGAAGCTGTGTACTGAGAAACACCAAGCTGACAAGAGGAAGTGGCTCGAAGAGAAGACGGTTCTGATCCGGCTGGCCAAGGAGGCCGAGGATAAGAGGAACCAGGAGATGAGGAAGTTTGCAGACGGCCGTAAGCGTCACGCCAAGCAGCAAGACCAAGTGGAAGGTCTGGTGGCCCAGCTCAGTGAGAAGGAGCAGGACCTACTGaagtggaggaaagagagggactcCCTGGTGACAGCTCTGGAGGTCCAGCTAACCAAACTCCTCTCCAGCAACGCAGACAAGGATGAACAGATAGCCAGTCTCCGCTGCCACGCCTCCTCTCAGCCAGCAGAGG

Function

NR:

description
kinesin-like protein KIF20B isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945866.1 False 6598 mRNA 0.47 33 7024970 7073332
TU1527336 True 953 TUCP 0.52 8 7034874 7057970

Neighbor

gene id symbol gene type direction distance location
oit3 oit3 coding upstream 320191 6679715 ~ 6704779 (+)
mcu mcu coding upstream 373385 6526795 ~ 6651585 (+)
LOC110491273 LOC106578809 coding upstream 642414 6334443 ~ 6382556 (+)
LOC110491277 LOC106578812 coding upstream 667121 6333340 ~ 6357849 (+)
slc29a3 slc29a3 coding upstream 735826 6252683 ~ 6289144 (+)
zgc:65997 LOC106578833 coding downstream 52415 7125747 ~ 7128548 (+)
pank1a LOC106578834 coding downstream 57715 7131047 ~ 7156797 (+)
LOC110491290 cisd1 coding downstream 91104 7164436 ~ 7171710 (+)
cnrip1b LOC106578837 coding downstream 110073 7183405 ~ 7191698 (+)
LOC110491294 LOC106578839 coding downstream 122727 7196059 ~ 7234383 (+)
G1335899 NA non-coding upstream 676 6993691 ~ 7024294 (+)
G1335912 NA non-coding upstream 8767 7014427 ~ 7016203 (+)
G1335888 NA non-coding upstream 58529 6966201 ~ 6966441 (+)
G1335875 NA non-coding upstream 81253 6942654 ~ 6943717 (+)
G1335843 NA non-coding upstream 138404 6886295 ~ 6886566 (+)
G1336394 NA non-coding downstream 14733 7088065 ~ 7088596 (+)
G1336399 NA non-coding downstream 21403 7094735 ~ 7095062 (+)
G1336401 NA non-coding downstream 21982 7095314 ~ 7095531 (+)
G1336421 NA non-coding downstream 23601 7096933 ~ 7097137 (+)
G1336426 NA non-coding downstream 29395 7102727 ~ 7102956 (+)
G1335763 NA other upstream 256384 6764312 ~ 6768586 (+)
G1335704 NA other upstream 433055 6590976 ~ 6591915 (+)
G1334592 NA other upstream 1320024 5703835 ~ 5704946 (+)
G1334530 NA other upstream 1503740 5519940 ~ 5521230 (+)
LOC110491218 LOC106578757 other upstream 2087291 4640198 ~ 4973348 (+)
G1336428 NA other downstream 34139 7107471 ~ 7108714 (+)
G1336651 NA other downstream 533382 7606714 ~ 7610802 (+)
G1337433 LOC106578852 other downstream 1124430 8197762 ~ 8198459 (+)
G1337438 NA other downstream 1133501 8206833 ~ 8207373 (+)
G1335921 NA other downstream 931 7058901 ~ 7059543 (+)

Expression


Co-expression Network