LOC110491320 (LOC106578876)


Basic Information

Item Value
gene id LOC110491320
gene name LOC106578876
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 9124217 ~ 9131393 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564684.2
GTAACGCACGTCGGAAGTGCAGGTGCATCAGCATCACAACAAGAGCGGAACAAGGCTGGCTGGTAACGGGGAGGCGATTTGATCCAGTTCACATTTCAGATTGcatctgtcattatttaacgttgTTCATTCCACACTCGGTAACATCGCAATGGCTTTGAATAAGAACAATTCTGAATCTGGAGGCGTCATTATCACCAACAATGAAAGtgtgttgatGAGCTATGAGAATGTGGAGCTGGTGTTCTGTGAAGCAGAGTGCCTGCCTGGTGCCTTCAGGAAGAGTAAGAAGGGGAGTATCTTCCTGACCCCCTACAGGGTGATATTTGTGGCGAAGGGGGGTCGTGATGCTCTGCAGTCCTTCATGATGCCTTTCTACCTGATGAAGGGCTGTGAGGTCAAACAGCCTGTCCTGGGGGCCAACTACATCAAAGGCACAGTCAGCGCAGAGCCcggagGGGGCTGGGAGGGCTGTGCCACCTTTAAGATGGTGTTTGCTGCAGGAGGAGCCATAGAGTTTGGACAGTACATGTTACAGGTCGCTGCACAAGCATCCAGAGGGCAGCCTGTGAGTGGTGGCTTTGGGGGTTGTCCCTACATGGGCAATGGGGCCTATGCTTACCCTCCTCCCCCGGCCAATGGGTACCCGGCGGGACCCCCACCCGGGTACTCTTACCCCAACCCCCCTCCACAAGGTGTATTCTACCCCAACCCACCAGCGTTTGATGGTCCTGCGGCCTACATGCCCCCTCCTCCCTACTCCGCCCCCCTGGGGCAGCAGGCCCCCCACGACCCTGCCCTGCCTTCCACACCTGCAGCGGAGGCAAAGGCAGCAGAGGCAGCAACCAGTGGCAGCTGTTCCACACTTCCTCCCACCTACTTGCCACAGgACAACCCACCCCCCTACTCCCCTACTGAAGACAAGAAGAGCCAGTAGAGAGCCTGTATCTCAGCTCCCACCCCTCCTTCACACGGCCTGTACCACcaccccatctctctatccctatgATGTCTTTGTTCCTCCTTTCTCTTCCACCAACCCCTCCTTTTGGTCTATATCCTCTCGGTCTACCTTGCTCCCTTTTTAAGtcactccacccctctcctcccctcctctggcCAGTCTCTTAACTCACAACCAGCTAGCTATGTCAGCTCCTTTTCCCAGCTCGTGTACAGTTACCTTCTGAGTTCCACTAAACAGTTCTCTCCACCTGACTTTAACTAAACAGTGTTACTTACAGCTTTTCTAGTGGTTGATGATATGATTGTAGCTTGTTTGAGCCAAAGATGTCAGGAAAAAGGGGAATATTAGGTTAAGACGGAGGTGTTTTTGACTGAGGTTTAGTAGCATTCTTGGGTACCTGCCTTTTTCTGCATTGCCAAACACTCCATTTTCTTGCCAGATCAGACAACGGCAAGTTGGCTAAAGCAGAAACGGACAGACATGCAGGCTCAAGGTTTAGCAGGTTGTTTTGGTGAGAACCTGGTTTATTTCAGAAGACCGTTGATGACTAATTGAACAGGACTGTGATTTCTCAGCTTTCCTAGCGAAAGGCTGTATATTGTTGATTTCATTTATTATTTCTCTGTACAGGCTTTTAATGTGACAACTTTTAATGAGAGGATAGCAGTAGATCATTGGACCAGGTCTTTGTTGAAAATTTACATATCGGAAATAACACccttctataaagggaatatagTGTAATTTGAGACTTTCCCGTTGTGTTGATAGGAACCAAAATGTCCGGTATAGTGGACAGCTATCTAGAACACTAAGAATCCCTGATCCTAGTTGAACTATCAAACTACATGGAAAGATGATCTTAGCTATCTGCGACTACTGCTACTTCCTGTGTGTGAATATAGAGCAGTTGCCCTATGATGTCATGTCCTGTGTCACTCTTCTGAACATTCTAGAACTTACTCACCCACCAAATCACATCAAGGAAATTAAACAAATGAAATAGTTCCTTGCATCACATCACTCTGCAGTGTTCTGGACTAACAGATTAGATCAATAGTCACATCTCTAACTACACTGATGGCTATCAACTTCTCTTGTGGTGTGTCCTTCACTGACATGTTTTGAGGTCAGTCTCCTGAATCTGATCTGAGCACCTTAATATTTgggcatctctctttctctctggcacAATGCAGCTGGAAGATTCTTTGCACTTTCAGAATGCTATGCATCGGGCCTCTTTGCGCCTGCCATGGCTATGtgtatagtaaaaaaaaaaaagtcatatGGCTATATTTATTTCAAGTTCCCACTAATTTATTGATGAATTCATTTGAAATGGTCAAATATATTATTAAAAAGACCAAAGCATGGGCTCAATTGTAACTAATATGGATTGAATTTTTATTAAACTGATCTTGTGATGTGAA

Function

NR:

description
WW domain-binding protein 2-like

GO: NA

KEGG:

id description
K22524 WBP2; WW domain-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564684.2 True 2400 mRNA 0.47 8 9124217 9131393

Neighbor

gene id symbol gene type direction distance location
LOC110492817 LOC106578874 coding upstream 16010 9091144 ~ 9108207 (+)
LOC110492816 LOC106578871 coding upstream 69669 9023761 ~ 9054548 (+)
LOC110492815 LOC106578870 coding upstream 115431 8978243 ~ 9008786 (+)
trnaq-cug-3 NA coding upstream 197056 8927090 ~ 8927161 (+)
LOC110491313 LOC106578866 coding upstream 225289 8887340 ~ 8898928 (+)
LOC110491321 mrpl38 coding downstream 7137 9084767 ~ 9143672 (+)
LOC110491323 NA coding downstream 32090 9163483 ~ 9171479 (+)
LOC110491327 LOC106578881 coding downstream 102632 9234025 ~ 9237375 (+)
LOC118939487 ogfod3 coding downstream 107588 9238981 ~ 9255876 (+)
galk1 galk1 coding downstream 1095825 10227218 ~ 10237422 (+)
G1338540 NA non-coding upstream 39487 9084418 ~ 9084730 (+)
G1338348 NA non-coding upstream 109590 9014338 ~ 9014627 (+)
G1338338 NA non-coding upstream 156039 8967941 ~ 8968178 (+)
G1338329 NA non-coding upstream 164233 8959401 ~ 8959984 (+)
G1338556 NA non-coding downstream 14879 9146272 ~ 9146509 (+)
G1338572 NA non-coding downstream 34410 9165803 ~ 9166020 (+)
G1338569 NA non-coding downstream 42417 9173810 ~ 9173996 (+)
G1338578 NA non-coding downstream 76434 9207827 ~ 9208112 (+)
G1338579 NA non-coding downstream 77006 9208399 ~ 9208740 (+)
G1338523 NA other upstream 61071 9060652 ~ 9063146 (+)
G1337942 NA other upstream 485046 8637166 ~ 8639171 (+)
G1337438 NA other upstream 916844 8206833 ~ 8207373 (+)
G1338571 NA other downstream 46654 9178047 ~ 9183173 (+)
G1339018 NA other downstream 494546 9625939 ~ 9626400 (+)
G1339045 NA other downstream 570582 9701975 ~ 9702380 (+)
G1339525 NA other downstream 928485 10059878 ~ 10060130 (+)
G1341172 NA other downstream 2650335 11781728 ~ 11782891 (+)

Expression


Co-expression Network