LOC110492880 (LOC106579038)


Basic Information

Item Value
gene id LOC110492880
gene name LOC106579038
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 13983550 ~ 13985369 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567351.2
TATTGTTTACGTACTGTTTATGATGTAGATATgctatatttaaaataaaaaaatacattaagtTCCCAAATCCGCAAGTGGGTTCTCCAAAACGATGTGGAAAGAATAATGTATATAGGTAGTGCTGAACGCCAAGTGTAGAAGATGCAAACGTTTATATGTGCAGAAAAGCGGATAAATTAGTTGTCAATGGAGAAATCTGACAACCAAACCGCAGGTGCTGAAACGGACAGCTCCGGGCGCAGCGTCCGTGCGCTCACCGGCTGCGTCCTGTTCATCCTAATCGTTTCAACGCTTCTTGGGAATACACTCGTTTGCGCCGCGGTGATCAAATTTAGACACCTTCGATCTAAAGTTACCAACTTTTTTGTCATCTCGTTGGCGGTATCAGATCTATTCGTGGCCGTTCTTGTGATGCCGTGGAAGGCTATGTCTGAGGTGGCCGGATGCTGGATCTTCGGCAGCTTCTGTGATACCTGGATAGCTTTTGACATCATGTGCTCCACCGCGTCAATTCTCAATCTTTGTATAATAAGTATGGACAGATACTGGGCAATTTCGAGTCCTTTTCGATATGAGCGTAAAATGACCCAGAGGTTTGCCTTCGTTATGATCGGAGTGGCATGGACCCTCTCCATTCTTATCTCCTTCATTCCAGTTCAGCTCAATTGGCACAAATCAGAGGAGGAAAATGCTACAGGGAACGAGATGAATGAAATCGAGGACTGCAACGCAAGCTTGAATAGCACATATGCCATATCTTCCTCATTGATCAGTTTTTACATTCCCGTCGTTATTATGGTTGGCACTTACACCCGGATCTACCGGATTGCGCAAACCCAGATCCGGAGGATATCATCGCTGGAGAGAGCGGTGGAACACGCGCAGAACAATCAGCAAGCAACCGAGCAAACAAACTCCTTTAAAAGAACTTTTAAAAAAGAAACGAAAGTTTTAAAGACACTTTCTATCATTATGGGAGTTTTTGTATTTTGCTGGTTACCTTTTTTCGTGGTCAATTGCATCGTACCTTTTTGTGACATCAATGATGTTGGTGATCGCCTGTGCGTAAGTAACACCACGTTTAACATGTTTGTGTGGTTTGGGTGGGCCAACTCATCGTTAAACCCAGTCATATACGCATTTAATGCTGATTTCAGGAAAGCATTCTCCACCATTCTGGGCTGCAATAGATACTGCTCCAGTTCTACTGTAGAAGCTGTCAATTTCAGCAACGAGTTGGTGTCTTACCACCACGACACTACGCTCCAGAGAGACACAAATATCACAGCCTCTGCGCACTGTGCTCAACGCCAGCCCGTGGTCTCACACGGTGAAGGCTTGGACGTACCGTTTGACAAAGTCTCCATTATCTCGGATGTTTCACGTCACCCAAGAAACCTTATCCTGCCTGCAACACTGCAGTTTGAATGTGAAGCAGAAATATCCTTAGACATGATGCCTTTCCCCTCAACTGGGCCCAGTGAGTGCTGTGCGATTCCAGGTCAAATTGAGGACATGTGAAACTAGTCTACTTTGTGACTTTTTCATGTttgatatacagtacactatTATACCTATTTTCTGATCTTCACATGGTGTTATAGTGTACAATATTCTGTCTAGCAGTGTATATAAAAACATTGTTACAAACCTCAGGTAATTGAGTTGAgtatgaaaaaataaataaatgactgaTCAgtaaattgcattttttttttaaatacaatttatAACAAAATGTAATAATGTCGGTACCATATATTGTCTATGTAAAATACCATGCCACTCAAAGGAAATAAAACAGACATCATCTCTGG

Function

NR:

description
D(5)-like dopamine receptor

GO: NA

KEGG:

id description
K04144 DRD1; dopamine receptor D1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567351.2 True 1820 mRNA 0.42 1 13983550 13985369

Neighbor

gene id symbol gene type direction distance location
LOC110491403 LOC106578980 coding downstream 47327 13932022 ~ 13936223 (-)
LOC110492837 LOC106578968 coding downstream 218629 13758121 ~ 13764921 (-)
LOC110491398 LOC106578967 coding downstream 230106 13741193 ~ 13753444 (-)
LOC110491396 LOC106578966 coding downstream 284747 13686859 ~ 13698803 (-)
LOC110491395 LOC106578965 coding downstream 316391 13659381 ~ 13667159 (-)
LOC110491405 LOC106578971 coding upstream 31566 14016935 ~ 14100687 (-)
trnaa-ugc-126 NA coding upstream 71614 14056983 ~ 14057056 (-)
LOC110491407 LOC106578978 coding upstream 120336 14105705 ~ 14110255 (-)
LOC110491406 lgi1 coding upstream 125208 14110577 ~ 14118040 (-)
LOC110491410 LOC106578975 coding upstream 162174 14147543 ~ 14160863 (-)
G1343668 NA non-coding downstream 2210 13981086 ~ 13981340 (-)
G1343650 NA non-coding downstream 19506 13963762 ~ 13964044 (-)
G1343645 NA non-coding downstream 22750 13960530 ~ 13960800 (-)
G1343643 NA non-coding downstream 25728 13957599 ~ 13957822 (-)
G1343640 NA non-coding downstream 27183 13956082 ~ 13956367 (-)
G1343885 NA non-coding upstream 58334 14043703 ~ 14074659 (-)
G1343936 NA non-coding upstream 151251 14136620 ~ 14139917 (-)
G1343938 NA non-coding upstream 155371 14140740 ~ 14141217 (-)
G1343937 NA non-coding upstream 156304 14141673 ~ 14142760 (-)
G1343939 NA non-coding upstream 157689 14143058 ~ 14143601 (-)
G1343452 LOC106578962 other downstream 349372 13585136 ~ 13634178 (-)
G1343278 NA other downstream 731882 13251434 ~ 13251668 (-)
G1342941 NA other downstream 1283382 12698986 ~ 12700168 (-)
G1341480 LOC106578921 other downstream 1964036 11946567 ~ 12097768 (-)
LOC110491342 LOC106578908 other downstream 2326987 11652429 ~ 11667766 (-)
G1345259 NA other upstream 1266008 15251377 ~ 15253570 (-)
G1345561 NA other upstream 1713616 15698985 ~ 15699263 (-)
G1347067 NA other upstream 2939153 16924522 ~ 16929432 (-)
G1347343 NA other upstream 3209961 17195330 ~ 17196129 (-)
LOC110491477 psme3 other upstream 3404016 17389099 ~ 17394265 (-)

Expression


Co-expression Network