Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118939491 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 16495588 ~ 16497341 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TLR20a protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118939491 | True | 1166 | mRNA | 0.49 | 2 | 16495588 | 16497341 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118939490 | NA | coding | downstream | 20256 | 16461836 ~ 16475332 (-) |
| pemt | pemt | coding | downstream | 59884 | 16354364 ~ 16435704 (-) |
| rasd1 | LOC106579016 | coding | downstream | 151282 | 16342156 ~ 16344306 (-) |
| cops3 | cops3 | coding | downstream | 212751 | 16268875 ~ 16282837 (-) |
| usp22 | LOC106579013 | coding | downstream | 227712 | 16227758 ~ 16267876 (-) |
| LOC110491454 | LOC106579017 | coding | upstream | 1785 | 16499126 ~ 16635552 (-) |
| lmf1 | lmf1 | coding | upstream | 156625 | 16653966 ~ 16681564 (-) |
| LOC110491459 | LOC106579021 | coding | upstream | 197873 | 16695214 ~ 16724979 (-) |
| LOC110491457 | LOC103024569 | coding | upstream | 231162 | 16728503 ~ 16733104 (-) |
| LOC110491465 | LOC106579029 | coding | upstream | 660973 | 17158314 ~ 17212112 (-) |
| G1346487 | NA | non-coding | downstream | 23210 | 16472130 ~ 16472378 (-) |
| G1346479 | NA | non-coding | downstream | 31504 | 16463812 ~ 16464084 (-) |
| G1346475 | NA | non-coding | downstream | 36684 | 16458648 ~ 16458904 (-) |
| G1346471 | NA | non-coding | downstream | 39508 | 16455848 ~ 16456080 (-) |
| G1346470 | NA | non-coding | downstream | 40936 | 16454385 ~ 16454652 (-) |
| G1346897 | NA | non-coding | upstream | 60456 | 16557797 ~ 16559479 (-) |
| G1346904 | NA | non-coding | upstream | 81842 | 16579183 ~ 16580486 (-) |
| G1346971 | NA | non-coding | upstream | 196643 | 16693984 ~ 16695101 (-) |
| G1347109 | NA | non-coding | upstream | 391161 | 16888502 ~ 16895370 (-) |
| G1347067 | NA | non-coding | upstream | 427181 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 796325 | 15698985 ~ 15699263 (-) |
| G1345259 | NA | other | downstream | 1242018 | 15251377 ~ 15253570 (-) |
| G1343452 | LOC106578962 | other | downstream | 2861410 | 13585136 ~ 13634178 (-) |
| G1343278 | NA | other | downstream | 3243920 | 13251434 ~ 13251668 (-) |
| G1342941 | NA | other | downstream | 3795420 | 12698986 ~ 12700168 (-) |
| G1347343 | NA | other | upstream | 697989 | 17195330 ~ 17196129 (-) |
| LOC110491477 | psme3 | other | upstream | 892044 | 17389099 ~ 17394265 (-) |
| prr15lb | atd4b | other | upstream | 1920274 | 18417572 ~ 18423242 (-) |
| G1349366 | NA | other | upstream | 2136690 | 18634031 ~ 18634405 (-) |
