LOC110491474 (LOC106579337)


Basic Information

Item Value
gene id LOC110491474
gene name LOC106579337
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 17376457 ~ 17380710 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564950.2
GACCAGGTTGAGCCAGTCCCCGATGGCAGCCACCCAGATGAGCTTGACCCCCACGTCCCTGTGCAGATAGAACCAGCTTGGGATGAAACAGAAGAATGTGGTATGCAGGTCTGCCACTGTAGAGGCTAAACCATCCCTCATAATGCCCATACTAGGTCTGCAGATGGATGGCCACCTCCACCCTCAGCTGTGGAAAAGATCCATGACTGCAGTGTGGATCCAGATCAGCAACCCAGGGACGGTGCACCAAAGCTGGTAGAGCTCCTCTGGAGCTCCAGGACTGTCTGTTCCCATCAGACTTTATTCAAGGTTAGGGCATTTGTTTGCCTTCAAGTGAACGTTGTAGACAGGCTCCCTGACCTTTAGCCTACAACCCAACATGGAGCTCCTGTTTCCCAAACCGGTAAACAGAAGTTCTCTGCTCTGGAGTGATAAGCTAGCCCCTGAAACAGGATGTCTGTGTGATAGTGGATGAATGTTTTTCAACTCCAGGACTGTACGTCTCTTGGCAAAGATCGTAGCAAGAACACGTTAAGCAGGCCAATGAAAATTGATTGACCTATTGATTGACCTTTTCATGTCATTACCACTTCAACCACATCCATCGTTATCATGTGAAACGAATGGCACGAAATCAATCAAAAATGCACTGACCTTATGACCTGCTGTAATGATAAGTTAATTTACTATTTCTTTCCAATAAGCTACAGCCTAAGATGAGTCCTGGCTTGGGGGTTGTCTAATCAGACTTGTTTACAGCACGGTAAGTACCATATCCAGGACCTAGTTTTATTGGTCAGTTATCTTTTCAGCATCTCTGGAGTAAGTCCCACACTTTTTAATGATTGACTCCCTTATGTAACTGACAGGTGGGCTAGCCACAGGACACCGACCACAATTTTCACAAAATCATCAGAAATTCATTGTGTAACTGGCAGATTATCTGCAGGTCATTGAGGAATGGGAGGATTTTGCATATCGTCAACATTTATTTAGCCtttcataatataaaataaacGTCTTTTGTTTTGCGTTCAAGCCTCAGTTTTGGATTTATTCCTTTTTTCGACAGTGTGCTGGTCTCGATCTCTTCCAGCCtttcataatatgacattttttacatttcttgttttttaaatgtgtttttttgaaACTGGCCAAAAAGGGGGCTTAGTAAGTTAGTACACGTGACTCTTTTAGTTTCTATCTTATCCATTTCATGGTCTTACAATGACAACTTACTCTATTACAAGAAAAACACTGGATTTTGCATTTCAATAGAGAAAAGCAAAATCAATGCCGTTGTCCACACATCCCCTTGGTTGGCTTGTTTTGCCACAAACTATTGTGTGGGCTATTTGTTAGGTTTTATTGTGAATTCCACTGGTCAATCATAAATGTCGCTTTTTTGTCTCCATGCTGTTTCAGGGTGAGCGACACAGAGACACTGATTGACTTTTGTTTTTACCCCTCCTTTGTACTTGTTTGTATTGTCTCTCCTGTtagtactgtacaaccctcaCAAACTCCCCTGTCCTGTTGTGTTTTATTACACATGTGCAAGGTTCAAAGATCAGGTTGTGCATGCCTTTGGGTGGTGGGTCCCTCTGGTATAAAAACAACCAGCAGACTCTTACATAGCTACAGTGCTCTCCTTCTGCAACACATCTCGCGTTGGCTTCCTAGACGGACAGTTCACTAGGGACAGTTGGAAAATGGAGGCAGTCACGGATGCCTTTCAGGGCTATGGGGTGAGCACCACTAATTACCTCCAGACCAACTATAAGGATGCACAGGGTTTGTTCCTGTGGGTGTCCTGGGCTGCTGACCTCAGGAACACCTTCTTCATCTTCTTCCCCCTCTGGTTCCACCTGCGGGAGTCGGTGGGTATCAAACTCATCTGGGTGGCAGTGATCGGAGACTGGCTCAACCTGGTCTTCAAGTGGATTCTGTTTGGCGAGAGGCCGTATTGGTGGGTTCATGAAACACCTTACTACAGCAATACCACTGCACCTCACATTGAACAATACCCCATGACCTGTGAGACTGGCCCAGGCAGTCCCTCTGGCCACGCTATGGGAGCCGCAAGCATCTACTACACACTGGTCACCTCCATCCTAGCCATCATGCTGACCAAGAAGAAGACGAGAGCTTCCACCAAGGGCATGTATCTGCGGGGCACATTGTGGGCATTCTTCTGGGCAGtccaggtgtgtgtctgtctctccagaGTCTTCATTGCTGCCCACTTCCCCCACCAAGTTGTCTGTGGAGTCATCACAGGTATTGTTGTGGCCGAGGCCTTCAACAGAACCCAGTGGATCTACGGAGCCAGTCTGAAGAAGTACTTCTACACCACCGTTTTCCTGCTCTCCTTCGCTGTTGGCTTCTACGTGCTGCTGAAGGCTCTGGGCGTGGACCTGCTGTGGACCCTGGAGAAAGCCCAGAAGTGGTGTGTGAGGGCTGAATGGGTCCACATGGACTCCACTCCCTTCGCCAGCCTCCTGCGCAACATGGGCACCCTGTTTGGCCTGGGCCTGGGCGTGCACTCGCCCCTCTACACCGAGAGCAAAAAGAACAGCAGCACCCCCTTCAGGGTGGGATGTATCGTTAcctcgctgctcctgctgcacctCTTTGACTCCTTCAAGCCCCCCACGCACACCGCCGCCCTCTTCTACCTTCTGTCTTTCTGTAAGAGCGCCACTGTCCCCCTGGCAACCGTGAGCATCATCCCCTACTGCATGTCAGGAGCATTGAGCAGCATACAGAGCAAGAAGCATCTGTGAGGTCGTTGGCGGCTGACGCACATAGACTTATGTATATGGAGCTCACTCCAGAGTTGAACAGTGTTCACTGGTGCTTCAATCCTTAATCATTCCATATTGACCTTCTTCCCAAATAGCCAAAGAGATGAACAATCTATTGTGGTCTTTGTCTACCATACATCCAGTCAGTCACTGTAAATGTCTTATTTTCCTATATACGCATAGTGTGGACACTGAAACGAAAGAACTACCCAGCGTATTACTCAAGAGGCAATTAAGACACTGATTTAATtggatataaaaaaaa

Function

NR:

description
glucose-6-phosphatase-like

GO: NA

KEGG:

id description
K01084 G6PC; glucose-6-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564950.2 True 3075 mRNA 0.47 5 17376457 17380710

Neighbor

gene id symbol gene type direction distance location
LOC110491471 LOC106579339 coding downstream 16827 17356395 ~ 17359630 (-)
LOC110491470 LOC106579340 coding downstream 24072 17306058 ~ 17352385 (-)
LOC110491465 LOC106579029 coding downstream 202523 17158314 ~ 17212112 (-)
LOC110491457 LOC103024569 coding downstream 643353 16728503 ~ 16733104 (-)
LOC110491459 LOC106579021 coding downstream 651478 16695214 ~ 16724979 (-)
LOC110491477 psme3 coding upstream 8665 17389099 ~ 17394265 (-)
LOC110491488 NA coding upstream 167495 17548205 ~ 17569945 (-)
LOC110492844 LOC106589301 coding upstream 290776 17671486 ~ 17682483 (-)
LOC110491480 LOC106589300 coding upstream 303761 17684471 ~ 17694082 (-)
LOC110491482 LOC106579329 coding upstream 333170 17713880 ~ 17868844 (-)
G1347556 NA non-coding downstream 82822 17287995 ~ 17293635 (-)
G1347345 arf1l non-coding downstream 145749 17207145 ~ 17230708 (-)
G1347609 LOC106579335 non-coding upstream 24835 17405545 ~ 17407873 (-)
G1347807 NA non-coding upstream 194844 17575554 ~ 17575791 (-)
G1347851 NA non-coding upstream 215456 17596166 ~ 17607260 (-)
G1347343 NA other downstream 180328 17195330 ~ 17196129 (-)
G1347067 NA other downstream 447025 16924522 ~ 16929432 (-)
G1345561 NA other downstream 1677194 15698985 ~ 15699263 (-)
G1345259 NA other downstream 2122887 15251377 ~ 15253570 (-)
G1343452 LOC106578962 other downstream 3742279 13585136 ~ 13634178 (-)
prr15lb atd4b other upstream 1036905 18417572 ~ 18423242 (-)
G1349366 NA other upstream 1253321 18634031 ~ 18634405 (-)
LOC110491541 LOC106579266 other upstream 1940160 19310970 ~ 19325094 (-)
G1349896 NA other upstream 2080331 19461041 ~ 19461815 (-)

Expression


Co-expression Network