ormdl3 (LOC106579326)


Basic Information

Item Value
gene id ormdl3
gene name LOC106579326
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 17981389 ~ 17983893 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564971.2
AGCTCTGAAAATGATGACGTTCTACATGAATTGCTGGCTGGTAGTGGAAGTGGAACTGTTTAGCCTGAATGTCGGGCTATAAACTGAAGAATACTTGAATAACATTGCATAAGAAAGCAATAAGAAGGTATTTGAATGAATGACTAATCGAAACGATATAGCAGTCTGACCTATTGATGCCAATTACCTAACCAGAGAAGGCTATAGTGAATAAGAGGAAAACAGCGATATAACGGACTGAAGCTAAAAGTGCGATTGAAGCCATTTTCTCCTACGAGGAGCGTGGTAACGTGACATCATGAACGTGGGCACGGCACACAGCGAGGTGAACCCCAACACACGGGTAATGAACAGCCGGGGCATCTGGCTCTCCTACCTCCTGGGCATCGGCCTGCTGCATGTCATCCTGCTCAGCATCCCCTTCGCCAGTGTGCCCGTGGTCTGGACGCTCACCAACCTCATACACAACCTGtgcaTGTACCTGTTGTTACACTTGGTGAAAGGAACCCCGTTTGAAACTCCGGACCAGAGCAAGGCTCGCTTCTACACATACTGGGAGCAGATGGACTATGGTGTACAATTCACTGCCTCACGCAAGTTCCTCACCATCACTCCTATCGTCCTCTACATCCTCACCAGCTTCTACACCAAGTATGACCGGGCCCACTTTGTGGTCAACACGGTCTCCCTGATGACCGTGCTCATTCCCAAGCTCCCCCAGCTTCACGGAGTTCGGATCTTTGGCATTAACAAGTACTGATGGGGCGGAAGAGGACACCGCCATtcctccatctccctgtggactgtAAACACAGAGTATCAGGCCCCGCCGTATTGGCCCCCAGCCCATAGGGATCCATGGCCCCTCTCTGGCTCACAGGGCTATTGAGCACTCTGCTAAATGAAACCTATGGGCGATAAACAACACAGAATTGACTTACAGGGCTCGGCTGGGTCCGAGCTCCTATGTGGT
>XM_021564972.2
AGCTCTGAAAATGATGACGTTCTACATGAATTGCTGGCTGGTAGTGGAAGTGGAACTGTTTAGCCTGAATGTCGGGCTATAAACTGAAGAATACTTGAATAACATTGCATAAGAAAGCAATAAGAAGGTATTTGAATGAATGACTAATCGAAACGATATAGCAGTCTGACCTATTGATGCCAATTACCTAACCAGAGAAGGCTATAGTGAATAAGAGGAAAACAGCGATATAACGGACTGAAGCTAAAAGTGCGATTGAAGCCATTTTCTCCTCAGACGAGGAGCGTGGTAACGTGACATCATGAACGTGGGCACGGCACACAGCGAGGTGAACCCCAACACACGGGTAATGAACAGCCGGGGCATCTGGCTCTCCTACCTCCTGGGCATCGGCCTGCTGCATGTCATCCTGCTCAGCATCCCCTTCGCCAGTGTGCCCGTGGTCTGGACGCTCACCAACCTCATACACAACCTGtgcaTGTACCTGTTGTTACACTTGGTGAAAGGAACCCCGTTTGAAACTCCGGACCAGAGCAAGGCTCGCTTCTACACATACTGGGAGCAGATGGACTATGGTGTACAATTCACTGCCTCACGCAAGTTCCTCACCATCACTCCTATCGTCCTCTACATCCTCACCAGCTTCTACACCAAGTATGACCGGGCCCACTTTGTGGTCAACACGGTCTCCCTGATGACCGTGCTCATTCCCAAGCTCCCCCAGCTTCACGGAGTTCGGATCTTTGGCATTAACAAGTACTGATGGGGCGGAAGAGGACACCGCCATtcctccatctccctgtggactgtAAACACAGAGTATCAGGCCCCGCCGTATTGGCCCCCAGCCCATAGGGATCCATGGCCCCTCTCTGGCTCACAGGGCTATTGAGCACTCTGCTAAATGAAACCTATGGGCGATAAACAACACAGAATTGACTTACAGGGCTCGGCTGGGTCCGAGCTCCTATGTGGT

Function

NR:

description
PREDICTED: ORM1-like protein 3

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564971.2 False 973 mRNA 0.51 4 17981389 17983893
XM_021564972.2 True 976 mRNA 0.51 4 17981389 17983893

Neighbor

gene id symbol gene type direction distance location
LOC110491482 LOC106579329 coding downstream 112545 17713880 ~ 17868844 (-)
LOC110491487 NA coding downstream 253593 17722887 ~ 17727796 (-)
LOC110491480 LOC106589300 coding downstream 287307 17684471 ~ 17694082 (-)
LOC110492844 LOC106589301 coding downstream 298906 17671486 ~ 17682483 (-)
LOC110491488 NA coding downstream 411507 17548205 ~ 17569945 (-)
LOC110491491 LOC106579324 coding upstream 42621 18026514 ~ 18073389 (-)
LOC110491492 LOC100380795 coding upstream 96379 18080272 ~ 18088335 (-)
myo1d LOC106579321 coding upstream 115066 18098959 ~ 18222915 (-)
LOC110491495 LOC106579322 coding upstream 239591 18223484 ~ 18226919 (-)
pdk2a LOC106579320 coding upstream 247633 18231526 ~ 18242110 (-)
G1348575 NA non-coding downstream 1133 17974581 ~ 17980256 (-)
G1348182 NA non-coding downstream 70183 17910910 ~ 17911206 (-)
G1348181 NA non-coding downstream 71037 17910121 ~ 17910352 (-)
G1348173 NA non-coding downstream 77701 17903427 ~ 17903688 (-)
G1348135 NA non-coding downstream 103773 17877387 ~ 17877616 (-)
G1348626 NA non-coding upstream 90475 18074368 ~ 18074619 (-)
G1348627 NA non-coding upstream 91260 18075153 ~ 18075400 (-)
G1348629 NA non-coding upstream 94651 18078544 ~ 18079050 (-)
G1348630 NA non-coding upstream 108595 18092488 ~ 18095817 (-)
G1348631 NA non-coding upstream 112990 18096883 ~ 18097176 (-)
LOC110491477 psme3 other downstream 589435 17389099 ~ 17394265 (-)
G1347343 NA other downstream 785260 17195330 ~ 17196129 (-)
G1347067 NA other downstream 1051957 16924522 ~ 16929432 (-)
G1345561 NA other downstream 2282126 15698985 ~ 15699263 (-)
G1345259 NA other downstream 2727819 15251377 ~ 15253570 (-)
prr15lb atd4b other upstream 433722 18417572 ~ 18423242 (-)
G1349366 NA other upstream 650138 18634031 ~ 18634405 (-)
LOC110491541 LOC106579266 other upstream 1336977 19310970 ~ 19325094 (-)
G1349896 NA other upstream 1477148 19461041 ~ 19461815 (-)
LOC110491553 LOC106579383 other upstream 1707799 19691616 ~ 19697840 (-)

Expression


Co-expression Network