pdk2a (LOC106579320)


Basic Information

Item Value
gene id pdk2a
gene name LOC106579320
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 18231526 ~ 18242110 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564981.2
GTCCTATTGGCTGCAGGTTTTCACCGAGCCTGTTCTTTTGGGCAATCAACATTGGAACAGAAAGAGCACTTGTAGTAGCcctatttttttcccccaaagcGATTTACTGAAGACGTCAACGATGAAATTCGTGAGATTTATAATGAAAAATGCTACATTGGCCAATGTGCCTAAACATATAGAACATTTTGCAAAATTTTCGCCGTCACCACTCTCTATGAAACAATTTCTCGATTTTGGTTCCACCAATGCATGCGAGGCGACATCATTTGTCTTTTTGAGACAAGAGCTACCTGTGCGACTATCTAACATCATGAAGGAGATCAATTTGCTACCTGACCGATTGCTTACAACCCCATCCGTGCAGATGGTGCAGAGCTGGTATGTGCAGAGCTTGATGGAAATCCTTGCGTTCTTGGACAAGACTCCTGACagccacagtgtcctggatgaGTTTGTGGACACCCTGGTGAATATCAGGAACAGGCACAATGAAGTAGTGCCCACCATGGCACAGGGCGTCATTGAGTACAAGTCGGTGTTCGGCCAGGACCCAGTCACCAACCAGAACATTCAGTACTTCCTGGACCGTTTCTACATGAGCCGTATATCTATCCGCATGCTTATCAACCAGCACACTCTTGTGTTTGATGGAGCAACGAATCCACTTCACCCCAACACAATAGGGAGCATCGACCCTcactgtgatgtcacagaggTGGTCAGAGATGCTTACCAGAGCGCCAAGTTGGTGTGTGATCAGTACTATCTGAGCTCGCCAGACCTGATGCTGCAAGAAATGAATGTCAACAACCGGAAACAACCTATAAGCATTGTCTATGTGCCCTCCCATCTCTACCACATGTTGTTTGAGCTTTTCAAGAATGCTATGAGGGCCACAATTGAGAACCATGATGCCAGCAACAGGCTACCACCCATTCAAGTCATGGTGGCCATTGGAGGAGAGGACCTGTCAATCAAGGTGAGTGACAGGGGTGGCGGAGTCCCTTTCAGGAAGATTGAGAATCTTTTCAGCTACATGTACTCTACGGCCCCCACGCCAGAGAGGGGTGAGCACTCTCAGACCCCATTGGCTGGCTTTGGCTACGGCCTGCCCATCTCCCGGCTCTACGCTCAGTACTTCCAGGGAGACCTGCAGCTCTACTCTATGGAGGGTTACGGCACTGACGCTGTCATCCACATGAAGGCCTTGTCCACAGACTCTGTGGAGAGGCTCCCGGTGTACAACAAGACAGCTCTGCGGAATTACAAGGTTAGCCAGGAGGCAGACGACTGGTGTGTGCCCAGCAGAGAACCCCTGGACCTGACCATTTACAGGGTAGCCAAATGAGGATAATGTCGACGCCACCCTGGTTAGATTGAGGCTCTGTATGCCAACAGCCAAGGCAGACAGCCACCTAACCCCGCCCACATATGACTGGATGTTTTCCATCCTGGTTTTGGCATTGGCATGTTTTCTTGTTCTCACAATGATGCCCTTCATGGTTTTCTTTTAGCTTAGATTATAAAAACATATAATCTTTGTTCACCTCCATGAGGGTTTTTATGGGAGTGCCAGATGttgataataaaataaaaaaaagttgtcACACTAATTATTCTCCCAAACATTTAATGGGCATACAAACATGGTTGCTTTACCCATGAAATGTTTGGGAGCATAAGAATGTGTGGCTTTCTTTTTCTAGTTTACTCTCCGTTAGTCAGCACTTCTATTAAAAACATTTCTAGGTGTGTGTCAGTTTATGCCTTTTACTATCGCTCGATGTTGATGAAATAAACATGGGAGGGTGTGCAGGGTAGTGCGGTCCCAATGTCATACTTCATTTTTGGGGGGAGAGATGTGGCAGGGTGGGTCTGAAGACCCAGATACTGTGCCCAGTATGTTGTTGAGAGGGTGTAGCGTGACCGTGGGCGAGTGAGAATATGTAACACCagttcagtatgttatggaacgTTCAGGTAGAAACGTTGTGTAGAGCAGCCAAGCCTTTCTATCATGTCGACTAGGGAATCACGGCATCTCTATACGTAACAttttctatctgcaacattcaGAATGTTGCGTCCTTCTGAACCGGACCGAGGTTGAAAAGACAATCCGATGTGTTGGTTGAACTCTCTGAGAGGATCTTTATGTACTGTAAACAGAAGTGAGCTGGAGCTGTTGAGGTGTGGTAGAAGTCCTTAGATGAACCAGTACTGTAGAATAACTGAATGTCCTGGCGGGCATTAGACCTCCCTTGCTCCAAATCGCTGACTGTCAGAAAATGCCACCTCAGCCTTAACTGCGTCAGTCAAGTTCTCTTTACTTGAACCATGTACATTATTAACAATGTAGTATTCAATCTATGAGAAGGCTGCTAATGACTTACTTATTTGATTCTAAAATAATATTACGTACTGTTCTACCATGTCTTGATGCCTTCATGAGTATTGGTCCTGATGTCTATATATTGATTTCATCATTTCAAGTACATTTTCTCTTGCCAGTTCAATGGACAGGATTCAACTAACAAAAATGAGTTGGTCTGTTCAGTGTTGTGACGTTCTGTATTCCTGTGAACTCAAGCTCTAGAGAAATACATTGTGGAAACAATTTTACCCAAGTTCATTTGCAGTAAGACAGTGATATACTTTGTGATAGGAAGCCAGTGTTCATCTTTTACGCACCGGTGTTCTATTGCCAGTGGCAAAGTTCATCAGAAGCTAGTTAAAACACATCCCAAAGGGCAAAGCACATCGTTCTTATTGTCTGTGACCCTTAAGGTTAGGCCAGTCACATAGGAATATTTGATGCTGTGTATGTGATGGGAAGATTCTCCCAGCCTATCCGCTTCTATCAATTCCCTTTTATTTTGTAATAAACTCTATACATTTCTTCAGTTATATTGTAAGTGTTTTAaatgaaaatatttttttcattgacATTGTAAATATGTGGTATTATTAAACCTATTTCAATGACAAA
>XM_036946372.1
GTGTCCTATTGGCTGCAGGTTTTCACCGAGCCTGTTCTTTTGGGCAATCAACATTGGAACAGAAAGAGCACTTGTAGTAGCcctatttttttcccccaaagcGATTTACTGAAGACGTCAACGATGAAATTCGTGAGATTTATAATGAAAAATGCTACATTGGCCAATGTGCCTAAACATATAGAACATTTTGCAAAATTTTCGCCGTCACCACTCTCTATGAAACAATTTCTCGATTTTGGTTCCACCAATGCATGCGAGGCGACATCATTTGTCTTTTTGAGACAAGAGCTACCTGTGCGACTATCTAACATCATGAAGGAGATCAATTTGCTACCTGACCGATTGCTTACAACCCCATCCGTGCAGATGGTGCAGAGCTGGTATGTGCAGAGCTTGATGGAAATCCTTGCGTTCTTGGACAAGACTCCTGACagccacagtgtcctggatgaGTTTGTGGACACCCTGGTGAATATCAGGAACAGGCACAATGAAGTAGTGCCCACCATGGCACAGGGCGTCATTGAGTACAAGTCGGTGTTCGGCCAGGACCCAGTCACCAACCAGAACATTCAGTACTTCCTGGACCGTTTCTACATGAGCCGTATATCTATCCGCATGCTTATCAACCAGCACAATGCTTACCAGAGCGCCAAGTTGGTGTGTGATCAGTACTATCTGAGCTCGCCAGACCTGATGCTGCAAGAAATGAATGTCAACAACCGGAAACAACCTATAAGCATTGTCTATGTGCCCTCCCATCTCTACCACATGTTGTTTGAGCTTTTCAAGAATGCTATGAGGGCCACAATTGAGAACCATGATGCCAGCAACAGGCTACCACCCATTCAAGTCATGGTGGCCATTGGAGGAGAGGACCTGTCAATCAAGGTGAGTGACAGGGGTGGCGGAGTCCCTTTCAGGAAGATTGAGAATCTTTTCAGCTACATGTACTCTACGGCCCCCACGCCAGAGAGGGGTGAGCACTCTCAGACCCCATTGGCTGGCTTTGGCTACGGCCTGCCCATCTCCCGGCTCTACGCTCAGTACTTCCAGGGAGACCTGCAGCTCTACTCTATGGAGGGTTACGGCACTGACGCTGTCATCCACATGAAGGCCTTGTCCACAGACTCTGTGGAGAGGCTCCCGGTGTACAACAAGACAGCTCTGCGGAATTACAAGGTTAGCCAGGAGGCAGACGACTGGTGTGTGCCCAGCAGAGAACCCCTGGACCTGACCATTTACAGGGTAGCCAAATGAGGATAATGTCGACGCCACCCTGGTTAGATTGAGGCTCTGTATGCCAACAGCCAAGGCAGACAGCCACCTAACCCCGCCCACATATGACTGGATGTTTTCCATCCTGGTTTTGGCATTGGCATGTTTTCTTGTTCTCACAATGATGCCCTTCATGGTTTTCTTTTAGCTTAGATTATAAAAACATATAATCTTTGTTCACCTCCATGAGGGTTTTTATGGGAGTGCCAGATGttgataataaaataaaaaaaagttgtcACACTAATTATTCTCCCAAACATTTAATGGGCATACAAACATGGTTGCTTTACCCATGAAATGTTTGGGAGCATAAGAATGTGTGGCTTTCTTTTTCTAGTTTACTCTCCGTTAGTCAGCACTTCTATTAAAAACATTTCTAGGTGTGTGTCAGTTTATGCCTTTTACTATCGCTCGATGTTGATGAAATAAACATGGGAGGGTGTGCAGGGTAGTGCGGTCCCAATGTCATACTTCATTTTTGGGGGGAGAGATGTGGCAGGGTGGGTCTGAAGACCCAGATACTGTGCCCAGTATGTTGTTGAGAGGGTGTAGCGTGACCGTGGGCGAGTGAGAATATGTAACACCagttcagtatgttatggaacgTTCAGGTAGAAACGTTGTGTAGAGCAGCCAAGCCTTTCTATCATGTCGACTAGGGAATCACGGCATCTCTATACGTAACAttttctatctgcaacattcaGAATGTTGCGTCCTTCTGAACCGGACCGAGGTTGAAAAGACAATCCGATGTGTTGGTTGAACTCTCTGAGAGGATCTTTATGTACTGTAAACAGAAGTGAGCTGGAGCTGTTGAGGTGTGGTAGAAGTCCTTAGATGAACCAGTACTGTAGAATAACTGAATGTCCTGGCGGGCATTAGACCTCCCTTGCTCCAAATCGCTGACTGTCAGAAAATGCCACCTCAGCCTTAACTGCGTCAGTCAAGTTCTCTTTACTTGAACCATGTACATTATTAACAATGTAGTATTCAATCTATGAGAAGGCTGCTAATGACTTACTTATTTGATTCTAAAATAATATTACGTACTGTTCTACCATGTCTTGATGCCTTCATGAGTATTGGTCCTGATGTCTATATATTGATTTCATCATTTCAAGTACATTTTCTCTTGCCAGTTCAATGGACAGGATTCAACTAACAAAAATGAGTTGGTCTGTTCAGTGTTGTGACGTTCTGTATTCCTGTGAACTCAAGCTCTAGAGAAATACATTGTGGAAACAATTTTACCCAAGTTCATTTGCAGTAAGACAGTGATATACTTTGTGATAGGAAGCCAGTGTTCATCTTTTACGCACCGGTGTTCTATTGCCAGTGGCAAAGTTCATCAGAAGCTAGTTAAAACACATCCCAAAGGGCAAAGCACATCGTTCTTATTGTCTGTGACCCTTAAGGTTAGGCCAGTCACATAGGAATATTTGATGCTGTGTATGTGATGGGAAGATTCTCCCAGCCTATCCGCTTCTATCAATTCCCTTTTATTTTGTAATAAACTCTATACATTTCTTCAGTTATATTGTAAGTGTTTTAaatgaaaatatttttttcattgacATTGTAAATATGTGGTATTATTAAACCTATTTCAATGACAAA

Function

NR:

description
pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 2, mitochondrial-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564981.2 False 2992 mRNA 0.44 11 18231526 18242108
XM_036946372.1 True 2904 mRNA 0.44 10 18231526 18242110

Neighbor

gene id symbol gene type direction distance location
LOC110491495 LOC106579322 coding downstream 4607 18223484 ~ 18226919 (-)
myo1d LOC106579321 coding downstream 8611 18098959 ~ 18222915 (-)
LOC110491492 LOC100380795 coding downstream 143191 18080272 ~ 18088335 (-)
LOC110491491 LOC106579324 coding downstream 158137 18026514 ~ 18073389 (-)
ormdl3 LOC106579326 coding downstream 247633 17981389 ~ 17983893 (-)
LOC100136345 osbpl7 coding upstream 154367 18396477 ~ 18409234 (-)
mrpl10 mrpl10 coding upstream 167665 18409775 ~ 18412088 (-)
prr15lb atd4b coding upstream 175462 18417572 ~ 18423242 (-)
si:ch211-194k22.8 LOC106579386 coding upstream 192075 18434185 ~ 18437208 (-)
cbx1b cbx1 coding upstream 205806 18447916 ~ 18457521 (-)
G1348689 NA non-coding downstream 32418 18198801 ~ 18199108 (-)
G1348669 NA non-coding downstream 67164 18163359 ~ 18164362 (-)
G1348631 NA non-coding downstream 134350 18096883 ~ 18097176 (-)
G1348630 NA non-coding downstream 135709 18092488 ~ 18095817 (-)
G1348629 NA non-coding downstream 152476 18078544 ~ 18079050 (-)
G1348784 NA non-coding upstream 92218 18334328 ~ 18334543 (-)
G1348800 tbx21 non-coding upstream 137423 18379533 ~ 18380412 (-)
G1348804 NA non-coding upstream 148136 18390246 ~ 18390523 (-)
G1348778 NA non-coding upstream 148661 18390771 ~ 18392168 (-)
G1348858 NA non-coding upstream 272368 18514478 ~ 18514714 (-)
LOC110491477 psme3 other downstream 839572 17389099 ~ 17394265 (-)
G1347343 NA other downstream 1035397 17195330 ~ 17196129 (-)
G1347067 NA other downstream 1302094 16924522 ~ 16929432 (-)
G1345561 NA other downstream 2532263 15698985 ~ 15699263 (-)
G1345259 NA other downstream 2977956 15251377 ~ 15253570 (-)
G1349366 NA other upstream 391921 18634031 ~ 18634405 (-)
LOC110491541 LOC106579266 other upstream 1078760 19310970 ~ 19325094 (-)
G1349896 NA other upstream 1218931 19461041 ~ 19461815 (-)
LOC110491553 LOC106579383 other upstream 1449582 19691616 ~ 19697840 (-)

Expression


Co-expression Network