Gene
RNA
| Item | Value |
|---|---|
| gene id | mrpl10 |
| gene name | mrpl10 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 18409775 ~ 18412088 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| mrpl10 | Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL10 (mitochondrial ribosomal protein L10). |
| description |
|---|
| 39S ribosomal protein L10, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0008152 | metabolic process | biological_process |
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| K02864 | RP-L10, MRPL10, rplJ; large subunit ribosomal protein L10 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021564983.2 | True | 1182 | mRNA | 0.51 | 5 | 18409775 | 18412088 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136345 | osbpl7 | coding | downstream | 541 | 18396477 ~ 18409234 (-) |
| pdk2a | LOC106579320 | coding | downstream | 167665 | 18231526 ~ 18242110 (-) |
| LOC110491495 | LOC106579322 | coding | downstream | 182856 | 18223484 ~ 18226919 (-) |
| myo1d | LOC106579321 | coding | downstream | 186860 | 18098959 ~ 18222915 (-) |
| LOC110491492 | LOC100380795 | coding | downstream | 321440 | 18080272 ~ 18088335 (-) |
| prr15lb | atd4b | coding | upstream | 5484 | 18417572 ~ 18423242 (-) |
| si:ch211-194k22.8 | LOC106579386 | coding | upstream | 22097 | 18434185 ~ 18437208 (-) |
| cbx1b | cbx1 | coding | upstream | 35828 | 18447916 ~ 18457521 (-) |
| LOC110491502 | skap1 | coding | upstream | 64989 | 18477077 ~ 18512413 (-) |
| hoxb1b | hoxb1 | coding | upstream | 110365 | 18522453 ~ 18525045 (-) |
| G1348778 | NA | non-coding | downstream | 17607 | 18390771 ~ 18392168 (-) |
| G1348804 | NA | non-coding | downstream | 19252 | 18390246 ~ 18390523 (-) |
| G1348800 | tbx21 | non-coding | downstream | 29363 | 18379533 ~ 18380412 (-) |
| G1348784 | NA | non-coding | downstream | 75232 | 18334328 ~ 18334543 (-) |
| G1348689 | NA | non-coding | downstream | 210667 | 18198801 ~ 18199108 (-) |
| G1348858 | NA | non-coding | upstream | 102390 | 18514478 ~ 18514714 (-) |
| LOC110491505 | hoxb3 | non-coding | upstream | 116087 | 18525206 ~ 18550690 (-) |
| G1349314 | NA | non-coding | upstream | 121466 | 18533554 ~ 18533859 (-) |
| G1349317 | NA | non-coding | upstream | 125988 | 18538076 ~ 18538335 (-) |
| LOC110491477 | psme3 | other | downstream | 1017821 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 1213646 | 17195330 ~ 17196129 (-) |
| G1347067 | NA | other | downstream | 1480343 | 16924522 ~ 16929432 (-) |
| G1345561 | NA | other | downstream | 2710512 | 15698985 ~ 15699263 (-) |
| G1345259 | NA | other | downstream | 3156205 | 15251377 ~ 15253570 (-) |
| G1349366 | NA | other | upstream | 221943 | 18634031 ~ 18634405 (-) |
| LOC110491541 | LOC106579266 | other | upstream | 908782 | 19310970 ~ 19325094 (-) |
| G1349896 | NA | other | upstream | 1048953 | 19461041 ~ 19461815 (-) |
| LOC110491553 | LOC106579383 | other | upstream | 1279604 | 19691616 ~ 19697840 (-) |
