LOC118939601


Basic Information

Item Value
gene id LOC118939601
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19297114 ~ 19297229 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036635.1
aaactctggtttctcttcagaTCGCATAAatctttcgccttttactaaagatttccgtggagaggaacaatATGAGTATCAATGAATTTTTTGATGCCCTGCTTAACTGCGGGGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036635.1 True 116 mRNA 0.40 1 19297114 19297229

Neighbor

gene id symbol gene type direction distance location
mfsd13a LOC106579271 coding upstream 2847 19283071 ~ 19294267 (+)
mrpl43 mrpl43 coding upstream 56177 19239411 ~ 19240937 (+)
LOC110491535 pdzd7 coding upstream 132299 19150008 ~ 19164815 (+)
LOC110491533 LOC105006829 coding upstream 148098 19141975 ~ 19149016 (+)
LOC110491534 LOC105006846 coding upstream 155434 19138817 ~ 19141680 (+)
LOC110491542 LOC106579267 coding downstream 28020 19325249 ~ 19340504 (+)
LOC110491544 dlx4b coding downstream 126882 19424111 ~ 19429658 (+)
itga3b itga3 coding downstream 195312 19492541 ~ 19549363 (+)
LOC110491549 LOC106579354 coding downstream 291137 19588366 ~ 19623529 (+)
LOC110491550 LOC106579260 coding downstream 326966 19624195 ~ 19629120 (+)
G1349282 NA non-coding upstream 17708 19279059 ~ 19279406 (+)
G1349280 NA non-coding upstream 19123 19277763 ~ 19277991 (+)
G1349279 NA non-coding upstream 19447 19277200 ~ 19277667 (+)
G1349278 NA non-coding upstream 20361 19276511 ~ 19276753 (+)
G1349274 NA non-coding upstream 23112 19273775 ~ 19274002 (+)
G1349286 NA non-coding downstream 361 19297590 ~ 19297920 (+)
G1349285 NA non-coding downstream 1268 19298497 ~ 19298779 (+)
G1349289 NA non-coding downstream 9395 19306624 ~ 19306844 (+)
G1349757 NA non-coding downstream 51394 19348623 ~ 19348852 (+)
G1349759 NA non-coding downstream 51900 19349129 ~ 19349453 (+)
LOC110491516 LOC106589273 other upstream 536694 18682058 ~ 18760420 (+)
G1348897 LOC106579309 other upstream 741662 18555177 ~ 18555452 (+)
LOC110491483 LOC106579330 other upstream 1693643 17596160 ~ 17623382 (+)
LOC110492842 LOC106579341 other upstream 2023134 17235828 ~ 17305959 (+)
G1350066 NA other downstream 439933 19737162 ~ 19738034 (+)
G1350275 NA other downstream 733501 20030730 ~ 20037978 (+)
G1351274 NA other downstream 1923536 21220765 ~ 21221147 (+)
G1351366 LOC106579206 other downstream 2104998 21402227 ~ 21405117 (+)
G1351501 LOC106579196 other downstream 2381995 21679224 ~ 21680881 (+)

Expression


Co-expression Network