LOC110491545



Basic Information


Item Value
gene id LOC110491545
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 19411518 ~ 19432319 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XR_002468846.2
CAGGGCACACGGATAAAGGGAAAGTGGGGTGTGTATAAAGAAAGAATGCAGGGCGAGGAAATTTCAATGAAACACAATAGTTCTCTTCCTCTTGTTGCAGGAGGGGGAACATAAGGCTATTTGTTTTTTCACCCTTTTTCTACTGTATGGCATCGGGAGACCCCTGTGAAAGAGCAGTTGAGACAACAGACGGAGATGAACACACTCCAGCTGGAGAACGATGAATGGCCCAGGGGACTTGGACTGAGGGAACACGTGCAGACCCAATCAACAGACAATACCGCGCGGCTTGAGGTTGCCAGGGCACAGTAGGGGTTCCATAAGCGTTGGTTTAAGCGTCTGTGGTGATGGGGTCTTTGAAGATGGAGGAAGACATCTGTCTGGATGACAAGGACAGGACAAGTCAACCTGTCTCACCTCAAGGACTGCTGGCTATGGCAATGGATGATAGCAGcagaaaaaaaaaattatgttccTCAAATACATGAAGTTCTATCAAGCCATCCAGAACTATAGTATGTGAAATTATGCTAAATCAAGTTACGTTGGAAATTCCCACTTCCTGTGTTTAAGACCGATGTATGCAGTGGCCTAGCAAGACAACTCTTTAAGATCTTCTACATGTTTTAATCTTTCTTACTGTAGCTATATGCAGTATTACTTTCTGTGTGTTTAGAGTCAATGTGATATGAAGACTAACTGCCTACCCCAGGGTCAAATCCCTCTCTTTATTAACTGGGTGGTACGAACCCTgagtgctgattggctgaaagctgtggtatatcagaccgtataccatgggtatgacaaaaaatgtatgtttactgttctaattacatttgtaacaagtttctaGCAATACgacacctcaggggtt

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_002468846.2 True 877 mRNA 0.44 3 19411518 19432319

Neighbor


gene id symbol gene type direction distance location
LOC110491543 LOC106579270 coding downstream 69379 19340326 ~ 19342139 (-)
LOC110491541 LOC106579266 coding downstream 86424 19310970 ~ 19325094 (-)
sema4gb sema4g coding downstream 132183 19244110 ~ 19279335 (-)
twnk LOC106579274 coding downstream 172277 19232951 ~ 19239241 (-)
LOC110491536 lzts2 coding downstream 201111 19164692 ~ 19210407 (-)
LOC110491546 dlx3b coding upstream 4876 19437195 ~ 19439759 (-)
LOC110491548 LOC106579262 coding upstream 122773 19555092 ~ 19590896 (-)
mpp2b LOC106579259 coding upstream 204017 19636336 ~ 19691342 (-)
LOC110491553 LOC106579383 coding upstream 259297 19691616 ~ 19697840 (-)
tut1 tut1 coding upstream 280797 19713116 ~ 19720557 (-)
G1349820 NA non-coding downstream 9898 19401364 ~ 19401620 (-)
G1349758 NA non-coding downstream 62610 19348611 ~ 19348908 (-)
G1349732 NA non-coding downstream 113586 19297726 ~ 19297932 (-)
G1349728 NA non-coding downstream 127370 19283138 ~ 19284148 (-)
G1349721 NA non-coding downstream 144418 19266677 ~ 19267100 (-)
G1349871 NA non-coding upstream 8622 19440941 ~ 19441203 (-)
G1349879 NA non-coding upstream 15968 19448287 ~ 19448554 (-)
G1349884 NA non-coding upstream 18921 19451240 ~ 19451546 (-)
G1349895 NA non-coding upstream 26599 19458918 ~ 19459259 (-)
G1349899 NA non-coding upstream 31199 19463518 ~ 19463744 (-)
G1349366 NA other downstream 777113 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 988332 18417572 ~ 18423242 (-)
LOC110491477 psme3 other downstream 2019564 17389099 ~ 17394265 (-)
G1347343 NA other downstream 2215389 17195330 ~ 17196129 (-)
G1349896 NA other upstream 28722 19461041 ~ 19461815 (-)
LOC110491567 LOC106579249 other upstream 898081 20330400 ~ 20334029 (-)
LOC110491585 NA other upstream 1207907 20640226 ~ 20650176 (-)
h3f3d LOC107388308 other upstream 1388380 20820699 ~ 20823171 (-)

Expression



Co-expression Network