Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110491546 |
| gene name | dlx3b |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 19437195 ~ 19439759 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| dlx3b | Enables sequence-specific DNA binding activity. Acts upstream of or within several processes, including sensory organ development; skeletal system development; and trigeminal nerve development. Predicted to be located in nucleus. Is expressed in several structures, including ectoderm; neural plate; neurogenic field; pharyngeal arch; and presumptive structure. Human ortholog(s) of this gene implicated in amelogenesis imperfecta type 4 and trichodontoosseous syndrome. Orthologous to human DLX3 (distal-less homeobox 3). |
| description |
|---|
| homeobox protein Dlx3b-like |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0003700 | DNA-binding transcription factor activity | molecular_function |
| GO:0000976 | transcription regulatory region sequence-specific DNA binding | molecular_function |
| id | description |
|---|---|
| K09315 | DLX3; homeobox protein DLX3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021565079.2 | True | 1463 | mRNA | 0.46 | 3 | 19437195 | 19439759 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491545 | NA | coding | downstream | 4876 | 19411518 ~ 19432319 (-) |
| LOC110491543 | LOC106579270 | coding | downstream | 95056 | 19340326 ~ 19342139 (-) |
| LOC110491541 | LOC106579266 | coding | downstream | 112101 | 19310970 ~ 19325094 (-) |
| sema4gb | sema4g | coding | downstream | 157860 | 19244110 ~ 19279335 (-) |
| twnk | LOC106579274 | coding | downstream | 197954 | 19232951 ~ 19239241 (-) |
| LOC110491548 | LOC106579262 | coding | upstream | 115333 | 19555092 ~ 19590896 (-) |
| mpp2b | LOC106579259 | coding | upstream | 196577 | 19636336 ~ 19691342 (-) |
| LOC110491553 | LOC106579383 | coding | upstream | 251857 | 19691616 ~ 19697840 (-) |
| tut1 | tut1 | coding | upstream | 273357 | 19713116 ~ 19720557 (-) |
| mki67 | ki67 | coding | upstream | 284075 | 19723834 ~ 19743882 (-) |
| G1349820 | NA | non-coding | downstream | 35575 | 19401364 ~ 19401620 (-) |
| G1349758 | NA | non-coding | downstream | 88287 | 19348611 ~ 19348908 (-) |
| G1349732 | NA | non-coding | downstream | 139263 | 19297726 ~ 19297932 (-) |
| G1349728 | NA | non-coding | downstream | 153047 | 19283138 ~ 19284148 (-) |
| G1349721 | NA | non-coding | downstream | 170095 | 19266677 ~ 19267100 (-) |
| G1349871 | NA | non-coding | upstream | 1182 | 19440941 ~ 19441203 (-) |
| G1349879 | NA | non-coding | upstream | 8528 | 19448287 ~ 19448554 (-) |
| G1349884 | NA | non-coding | upstream | 11481 | 19451240 ~ 19451546 (-) |
| G1349895 | NA | non-coding | upstream | 19159 | 19458918 ~ 19459259 (-) |
| G1349899 | NA | non-coding | upstream | 23759 | 19463518 ~ 19463744 (-) |
| G1349366 | NA | other | downstream | 802790 | 18634031 ~ 18634405 (-) |
| prr15lb | atd4b | other | downstream | 1014009 | 18417572 ~ 18423242 (-) |
| LOC110491477 | psme3 | other | downstream | 2045241 | 17389099 ~ 17394265 (-) |
| G1347343 | NA | other | downstream | 2241066 | 17195330 ~ 17196129 (-) |
| G1349896 | NA | other | upstream | 21282 | 19461041 ~ 19461815 (-) |
| LOC110491567 | LOC106579249 | other | upstream | 890641 | 20330400 ~ 20334029 (-) |
| LOC110491585 | NA | other | upstream | 1200467 | 20640226 ~ 20650176 (-) |
| h3f3d | LOC107388308 | other | upstream | 1380940 | 20820699 ~ 20823171 (-) |
