LOC110491568


Basic Information

Item Value
gene id LOC110491568
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 20285809 ~ 20286964 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110491568
tgtcagcacattcaactatgtaaagaaaaaagtatttaataagaatatttcattcattcagatctaggatgtgttattttagtgttccctttatttttttgagcagtgtatatagggCAAGTTACTCCTTGCATATATTTTTTCTATTCCCTGCTTTGTATTGTTTTTAGACCAAATGGCGACAGCCACACGTAATCAGGTCCTGTCACTGTATATTAGGGTATTTTGGATCGCCTGGGGCGCAGTCCACACTCCCACAAGACACTGTGAGTGACAGAAGGTACATTGTCCAGGAGGCCCAGACCCTCTTCAGACAGAACCAACAGTCAAAAAGACAGACCCTATGTTTGTCTTTGACAGATCAGGAATCAATAAAGAAGTGCTTAGCAGAATGTGAGACAAGGATAGAAATTGGTCTTTATTACAGGAATCCCTATCCAAGACTTATCTACCTGCTTATAATGGGACTGGCAACCCATAAAGGCAGGAAGCTGAAAGCACAGCAACGCATGAGGAAGCAGGCCAGCCAGTTTACTTACAGTCACATGAGGACAGCTGATACTACAGCTGATACTAGATGAACTCTATATTCTTGTGAAAGGGTTGATGTTACCAAGGACAGGAGGAAAGTTACTggctaatctcaggagttgagtTGAAAATCCATCTTATATATTGGAGAAAAAAGTAATTCATTTCCAAGTATATTTATGCATGGGATTCCTGACGAGAGCTGCTATGTGGATGTCAGCATTTTCTGTCCTATAAGATAAGTAGCCATAAAGATTTGTGATACTATTTTGAATATATTTATCATTTCAATAAATTGAGTT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110491568 True 833 mRNA 0.39 4 20285809 20286964

Neighbor

gene id symbol gene type direction distance location
kcnj12a LOC106579252 coding downstream 118167 20153681 ~ 20167642 (-)
med24 med24 coding downstream 161275 20083758 ~ 20124534 (-)
top2a top2a coding downstream 231720 20030374 ~ 20054089 (-)
LOC110491558 LOC106579256 coding downstream 258479 20020695 ~ 20027330 (-)
raraa LOC100136372 coding downstream 316424 19752456 ~ 19969385 (-)
LOC110491567 LOC106579249 coding upstream 43441 20330400 ~ 20334029 (-)
fam234a fam234a coding upstream 52145 20339109 ~ 20347491 (-)
LOC110491569 LOC106579243 coding upstream 66918 20353882 ~ 20366564 (-)
LOC110491577 LOC106579241 coding upstream 174160 20461124 ~ 20469565 (-)
LOC110491584 cxb5 coding upstream 336924 20623888 ~ 20625318 (-)
G1351804 dnah3 non-coding downstream 4553 20280826 ~ 20281256 (-)
G1351802 NA non-coding downstream 5042 20280427 ~ 20280767 (-)
G1351801 NA non-coding downstream 5443 20280098 ~ 20280366 (-)
G1351798 NA non-coding downstream 9054 20276531 ~ 20276755 (-)
G1351797 dnah3 non-coding downstream 10025 20275541 ~ 20275784 (-)
G1351816 NA non-coding upstream 24461 20311425 ~ 20312434 (-)
G1351830 NA non-coding upstream 88288 20375252 ~ 20375533 (-)
G1351832 LOC106579242 non-coding upstream 90592 20377556 ~ 20386225 (-)
G1351844 LOC106579242 non-coding upstream 107618 20394582 ~ 20402250 (-)
G1351848 NA non-coding upstream 117628 20404592 ~ 20404827 (-)
LOC110491553 LOC106579383 other downstream 588151 19691616 ~ 19697840 (-)
G1349896 NA other downstream 823994 19461041 ~ 19461815 (-)
LOC110491541 LOC106579266 other downstream 960755 19310970 ~ 19325094 (-)
G1349366 NA other downstream 1651404 18634031 ~ 18634405 (-)
prr15lb atd4b other downstream 1862623 18417572 ~ 18423242 (-)
LOC110491585 NA other upstream 353262 20640226 ~ 20650176 (-)
h3f3d LOC107388308 other upstream 533735 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 922499 21209463 ~ 21210794 (-)
si:ch211-183d21.3 LOC106579210 other upstream 974100 21255836 ~ 21288348 (-)

Expression


Co-expression Network