fam234a (fam234a)


Basic Information

Item Value
gene id fam234a
gene name fam234a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 20339109 ~ 20347491 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565119.2
TCGTTCAAATGATCCCAGATTGCAATGACTATTTCACGATAGCTAGTAGGTGCTTTAAGGTGTGAATTGTTTACGCAGGTGAAGTTGGATTGACAGTTATCGATCAAACAAAGACACGGACAGAAGTAGCTTCTAAAGTCTGTTCGGGCTATGACACATTGCTGAAGAGATAATGGAGCCAACAGACCATGCCACAGAAGCCGACCCCctgaagagggaggaggatggggttGAGGGTGGTGGAACTGCACCACCAGCGCCGACCAAGAAGAAGAGTTTGGGTCTGGCCAAGTTGTCCCACTGGAGGACGGCtgccttcttcctctccctcttcctctgcctcATCATCGTCTTCGCCTTCTCTTTCATCATCCCCTGTCCCGTCCGTCCGCAATACCTCACCTTCTGGAACCGCACCTTCCCCCAAGCAGCCACCTATGATTTCCTGGCCATTGAGGATGCAAGCAAAGACAAAGTGATGGACGTGTTGTTTGTCCTGAAGGCGCAGGAGGGCAGTCAGAACGTTAGTTGTTTGGCTGAAGGTCTGGACACaccttgtgtgtttgtgtcggcGGTAGCAGGGACCAACGGGGAGACTCTGTGGGAGCGGCCCTTGGCCCCTGAGTTCCACTGGGCCCAGTGTGGTCTGGACGGCCTTGGAGAAACCGACAGGGGCTGCCTGCTGTCTCACTCCAACCAGCTCACTGCCATCAACAAATACACTGGAGTGGTGACGTGGGCGCGGCTCCAGCCTCCCAACCTGAGGAGTACCTTACCGGTCCTCAGTGTCTCAGACCTGGATGGGGACGGGGTAAGCGACGTGGCTCTGGTGGCGCCCAGCCCAACGCAGACACAGCTGGCGATCCTCTCAGGGAAGACCGGTGTCCAGATTGGCTCAGAGGTGGTTCTTGACACCGCTGAGTGTGCCATGCATCTCCTCCACTCCACAGGGAAAGGCTCCAACTATGTACTGCTCCAGAAAGACTCGGGATTGTATGGCCTGGCCCTGTGGAGGATTGCAGCCCAGGCTAAGGCAGGCATGGAAAAAGGCCTCAAGAAGGACAAGCACTGGGAGCGCAAAGCCAATGACTCCTCTGGCCTTGTATCAATCTATGAGTCTGGGACATTGAGATACGTGTTAAGGACAGGGAAGGCAGAGGGTCCCTCCAACCTACTATTGGTCACTGGGGGCAGTGTGGTGCTGATAGATGGTGACAGTCTGAACTTACTGTGGAGAGTCAACACCAGCACAGTCCTCAGCGAGCCTTCTTTTGGCCACTTCAACAAAGATGGCACACTCGACATAGTGATCGAGGAGGACATTGGCAACCGCATTAAAAGGGTGGTGATCCTGGACGGAAACACTGGAGGCACAGTGTGGGAGGTCAACCTACTGGCCAGCCCCAACTCACCCAAGCCAGCCTCAGTCAACACCATCAACTCCTTCTCTGTGTTCATGTTCTGGGGGCTGATGCCCTCCGAGGCCAACACTACTAGGGATTTGAGTGAGGAGCGGCGCTCCTACATGCTGTATCCCCACTACTCCTCAGTTCTCCTGGAGAAGAGCAACGTCATGGACCACATCATCGCGTTTAAAGccactctgTTGGAGCGGGGGCGCCACGCCTGCTACATCATGTTGACGGGGCCCGAGGGGGAGGGGGCCGAGGGGACGGTGGACCTTAGCAAGCGCAAACTGAAACAGGACGTCACCGACAGCCGGGTCCTCCGCCTGGGCTCCCTAAGCAGCAAAGACACTAACGAGGACATCAAAGAGGCCTTCCAGAGACTGCGTTTCAGCGATGAGTGACAGGCCACTGTTACCATGACAACATTGCTGCTGATATCGAAACTGTGTTACAATAGATATGACAACCGTTACTGCTGACAATCAACCAACTGTGTAGCTATGGTTACCTTAAAGCTGACTACTAAACCTTCTTCTGCTGACCTTGTATTCCAACTGTCCCATCATGACAATCAGATTAATTTAGCTCAGTTTTCTTAGGGTGGAAATAGGCAAGGTAGAGGCAGACTTGGCTTTGGGTCGATGCAACCAATAACTGCACTAATCACAGAAGACTGCCAGGGCATACCAACCAGGCAATATGGTATTATCAGGTACTGTATCTGAATTCATTTATGCACAACTAGTAGGCTACCGTGTGGGATAGTTTTTAGATACCTTTGCTGTAGCAACTTCAGCCTCTGTAAAGGTGGCTAAAGTGACTAAGCGTTTATGTTATGCAACAAAAAGAGGCACTAAAAGCCCCAAAGAGCTGCATGGGCAACCCTGTGGTTAGTGGAAATATCTTAAGGGTACTGCTTCCATATAAAATTACAAGTCATAGCCTTATATTGTAGCCAGAGGTACTGTGGTAGATGACAATCAGATGAAACTAGTAGCAGGTACTGTACTATTCCAAGTTGCTGTGAATTAGGGTATAATTTAAATGCACATTGACATAGCTGTAGGCCCTGTATGAGGGACTCAAGCCTTGAAAGTTGAACGTTTCTGGTGATCTGTGTGTTGATGTTCAAATCAGGCAAAAGATAAAGGGAAAGCTTGAGAAAATtcttatgcccccccccccccccccccatctcttaaAAAAAATGCTTTAAAGTGATCTTGAATGGGAATGAGGGTTTTATAGTTTGCCTTATACATGAATATATTGAACCTTCTTTTTGAGATGATTTTTCCTtctttttacttatctattgatCTCTAAAAACATTTTTCAGATCTGAGCGAGCCGACACCCGCATAGCTGTTGTTTTTGCAGTGTTGGAGGAGGAACTTGGGGCTCTATTCAACCCGTATCACCGAAGTTCAGCTTTGTAGTGTGATTGAAATGCAAAGGCATGTTCGCGCTTTAGCGGCAaccgcattcacggtaaacgctacATGTCGGCCCAATTGGAAATGACCTTTTACATTTCTATCGCTGAATCTGCAACCAGAAATAGCTATTGGTTTTCTGGTTCGTTAAAAGAGCTAAACTTAGATATGTTTTTGTTGGTTTGATAAATTAGACCATGCCCATTTCAAGCTTATCTTTCAAAAAAAAGTTACATCAGAATATTTAgccaagttagctggctaactcattgatcctatTTTGtagtattaccccccccccccccccccccccacagctttCGAAGTCCCTGATTTTAGACACAATTTGCTGTGTAGTTGCGTATCAGCCAGACTAGGTGGAATTGCATGAGCTGCCAATTCCGCAAGCTGCTCCAAGCATAACTggtgccacgttcaaaacaactgggaacttggaaatgTCCAACTTCAGTGTATTCAAAACAACTGaactcgt
>XM_021565120.2
AAGCTGAAACGTAAAACGGGTCTGTTCGGGCTATGACACATTGCTGAAGAGATAATGGAGCCAACAGACCATGCCACAGAAGCCGACCCCctgaagagggaggaggatggggttGAGGGTGGTGGAACTGCACCACCAGCGCCGACCAAGAAGAAGAGTTTGGGTCTGGCCAAGTTGTCCCACTGGAGGACGGCtgccttcttcctctccctcttcctctgcctcATCATCGTCTTCGCCTTCTCTTTCATCATCCCCTGTCCCGTCCGTCCGCAATACCTCACCTTCTGGAACCGCACCTTCCCCCAAGCAGCCACCTATGATTTCCTGGCCATTGAGGATGCAAGCAAAGACAAAGTGATGGACGTGTTGTTTGTCCTGAAGGCGCAGGAGGGCAGTCAGAACGTTAGTTGTTTGGCTGAAGGTCTGGACACaccttgtgtgtttgtgtcggcGGTAGCAGGGACCAACGGGGAGACTCTGTGGGAGCGGCCCTTGGCCCCTGAGTTCCACTGGGCCCAGTGTGGTCTGGACGGCCTTGGAGAAACCGACAGGGGCTGCCTGCTGTCTCACTCCAACCAGCTCACTGCCATCAACAAATACACTGGAGTGGTGACGTGGGCGCGGCTCCAGCCTCCCAACCTGAGGAGTACCTTACCGGTCCTCAGTGTCTCAGACCTGGATGGGGACGGGGTAAGCGACGTGGCTCTGGTGGCGCCCAGCCCAACGCAGACACAGCTGGCGATCCTCTCAGGGAAGACCGGTGTCCAGATTGGCTCAGAGGTGGTTCTTGACACCGCTGAGTGTGCCATGCATCTCCTCCACTCCACAGGGAAAGGCTCCAACTATGTACTGCTCCAGAAAGACTCGGGATTGTATGGCCTGGCCCTGTGGAGGATTGCAGCCCAGGCTAAGGCAGGCATGGAAAAAGGCCTCAAGAAGGACAAGCACTGGGAGCGCAAAGCCAATGACTCCTCTGGCCTTGTATCAATCTATGAGTCTGGGACATTGAGATACGTGTTAAGGACAGGGAAGGCAGAGGGTCCCTCCAACCTACTATTGGTCACTGGGGGCAGTGTGGTGCTGATAGATGGTGACAGTCTGAACTTACTGTGGAGAGTCAACACCAGCACAGTCCTCAGCGAGCCTTCTTTTGGCCACTTCAACAAAGATGGCACACTCGACATAGTGATCGAGGAGGACATTGGCAACCGCATTAAAAGGGTGGTGATCCTGGACGGAAACACTGGAGGCACAGTGTGGGAGGTCAACCTACTGGCCAGCCCCAACTCACCCAAGCCAGCCTCAGTCAACACCATCAACTCCTTCTCTGTGTTCATGTTCTGGGGGCTGATGCCCTCCGAGGCCAACACTACTAGGGATTTGAGTGAGGAGCGGCGCTCCTACATGCTGTATCCCCACTACTCCTCAGTTCTCCTGGAGAAGAGCAACGTCATGGACCACATCATCGCGTTTAAAGccactctgTTGGAGCGGGGGCGCCACGCCTGCTACATCATGTTGACGGGGCCCGAGGGGGAGGGGGCCGAGGGGACGGTGGACCTTAGCAAGCGCAAACTGAAACAGGACGTCACCGACAGCCGGGTCCTCCGCCTGGGCTCCCTAAGCAGCAAAGACACTAACGAGGACATCAAAGAGGCCTTCCAGAGACTGCGTTTCAGCGATGAGTGACAGGCCACTGTTACCATGACAACATTGCTGCTGATATCGAAACTGTGTTACAATAGATATGACAACCGTTACTGCTGACAATCAACCAACTGTGTAGCTATGGTTACCTTAAAGCTGACTACTAAACCTTCTTCTGCTGACCTTGTATTCCAACTGTCCCATCATGACAATCAGATTAATTTAGCTCAGTTTTCTTAGGGTGGAAATAGGCAAGGTAGAGGCAGACTTGGCTTTGGGTCGATGCAACCAATAACTGCACTAATCACAGAAGACTGCCAGGGCATACCAACCAGGCAATATGGTATTATCAGGTACTGTATCTGAATTCATTTATGCACAACTAGTAGGCTACCGTGTGGGATAGTTTTTAGATACCTTTGCTGTAGCAACTTCAGCCTCTGTAAAGGTGGCTAAAGTGACTAAGCGTTTATGTTATGCAACAAAAAGAGGCACTAAAAGCCCCAAAGAGCTGCATGGGCAACCCTGTGGTTAGTGGAAATATCTTAAGGGTACTGCTTCCATATAAAATTACAAGTCATAGCCTTATATTGTAGCCAGAGGTACTGTGGTAGATGACAATCAGATGAAACTAGTAGCAGGTACTGTACTATTCCAAGTTGCTGTGAATTAGGGTATAATTTAAATGCACATTGACATAGCTGTAGGCCCTGTATGAGGGACTCAAGCCTTGAAAGTTGAACGTTTCTGGTGATCTGTGTGTTGATGTTCAAATCAGGCAAAAGATAAAGGGAAAGCTTGAGAAAATtcttatgcccccccccccccccccccatctcttaaAAAAAATGCTTTAAAGTGATCTTGAATGGGAATGAGGGTTTTATAGTTTGCCTTATACATGAATATATTGAACCTTCTTTTTGAGATGATTTTTCCTtctttttacttatctattgatCTCTAAAAACATTTTTCAGATCTGAGCGAGCCGACACCCGCATAGCTGTTGTTTTTGCAGTGTTGGAGGAGGAACTTGGGGCTCTATTCAACCCGTATCACCGAAGTTCAGCTTTGTAGTGTGATTGAAATGCAAAGGCATGTTCGCGCTTTAGCGGCAaccgcattcacggtaaacgctacATGTCGGCCCAATTGGAAATGACCTTTTACATTTCTATCGCTGAATCTGCAACCAGAAATAGCTATTGGTTTTCTGGTTCGTTAAAAGAGCTAAACTTAGATATGTTTTTGTTGGTTTGATAAATTAGACCATGCCCATTTCAAGCTTATCTTTCAAAAAAAAGTTACATCAGAATATTTAgccaagttagctggctaactcattgatcctatTTTGtagtattaccccccccccccccccccccccacagctttCGAAGTCCCTGATTTTAGACACAATTTGCTGTGTAGTTGCGTATCAGCCAGACTAGGTGGAATTGCATGAGCTGCCAATTCCGCAAGCTGCTCCAAGCATAACTggtgccacgttcaaaacaactgggaacttggaaatgTCCAACTTCAGTGTATTCAAAACAACTGaactcgt
>XM_036946457.1
TATCAACAATGAATGCTAGAGTGGACGTAATTAGCTATGGATACAAACATTAAATCGCGAAACAACAACTAGGCCGGCGACAGATCATGATTGAGCTGCTTTTATGTCACACAGCCGTCCTCTTGTACGCCATTCATTCAAGGTCTGTTCGGGCTATGACACATTGCTGAAGAGATAATGGAGCCAACAGACCATGCCACAGAAGCCGACCCCctgaagagggaggaggatggggttGAGGGTGGTGGAACTGCACCACCAGCGCCGACCAAGAAGAAGAGTTTGGGTCTGGCCAAGTTGTCCCACTGGAGGACGGCtgccttcttcctctccctcttcctctgcctcATCATCGTCTTCGCCTTCTCTTTCATCATCCCCTGTCCCGTCCGTCCGCAATACCTCACCTTCTGGAACCGCACCTTCCCCCAAGCAGCCACCTATGATTTCCTGGCCATTGAGGATGCAAGCAAAGACAAAGTGATGGACGTGTTGTTTGTCCTGAAGGCGCAGGAGGGCAGTCAGAACGTTAGTTGTTTGGCTGAAGGTCTGGACACaccttgtgtgtttgtgtcggcGGTAGCAGGGACCAACGGGGAGACTCTGTGGGAGCGGCCCTTGGCCCCTGAGTTCCACTGGGCCCAGTGTGGTCTGGACGGCCTTGGAGAAACCGACAGGGGCTGCCTGCTGTCTCACTCCAACCAGCTCACTGCCATCAACAAATACACTGGAGTGGTGACGTGGGCGCGGCTCCAGCCTCCCAACCTGAGGAGTACCTTACCGGTCCTCAGTGTCTCAGACCTGGATGGGGACGGGGTAAGCGACGTGGCTCTGGTGGCGCCCAGCCCAACGCAGACACAGCTGGCGATCCTCTCAGGGAAGACCGGTGTCCAGATTGGCTCAGAGGTGGTTCTTGACACCGCTGAGTGTGCCATGCATCTCCTCCACTCCACAGGGAAAGGCTCCAACTATGTACTGCTCCAGAAAGACTCGGGATTGTATGGCCTGGCCCTGTGGAGGATTGCAGCCCAGGCTAAGGCAGGCATGGAAAAAGGCCTCAAGAAGGACAAGCACTGGGAGCGCAAAGCCAATGACTCCTCTGGCCTTGTATCAATCTATGAGTCTGGGACATTGAGATACGTGTTAAGGACAGGGAAGGCAGAGGGTCCCTCCAACCTACTATTGGTCACTGGGGGCAGTGTGGTGCTGATAGATGGTGACAGTCTGAACTTACTGTGGAGAGTCAACACCAGCACAGTCCTCAGCGAGCCTTCTTTTGGCCACTTCAACAAAGATGGCACACTCGACATAGTGATCGAGGAGGACATTGGCAACCGCATTAAAAGGGTGGTGATCCTGGACGGAAACACTGGAGGCACAGTGTGGGAGGTCAACCTACTGGCCAGCCCCAACTCACCCAAGCCAGCCTCAGTCAACACCATCAACTCCTTCTCTGTGTTCATGTTCTGGGGGCTGATGCCCTCCGAGGCCAACACTACTAGGGATTTGAGTGAGGAGCGGCGCTCCTACATGCTGTATCCCCACTACTCCTCAGTTCTCCTGGAGAAGAGCAACGTCATGGACCACATCATCGCGTTTAAAGccactctgTTGGAGCGGGGGCGCCACGCCTGCTACATCATGTTGACGGGGCCCGAGGGGGAGGGGGCCGAGGGGACGGTGGACCTTAGCAAGCGCAAACTGAAACAGGACGTCACCGACAGCCGGGTCCTCCGCCTGGGCTCCCTAAGCAGCAAAGACACTAACGAGGACATCAAAGAGGCCTTCCAGAGACTGCGTTTCAGCGATGAGTGACAGGCCACTGTTACCATGACAACATTGCTGCTGATATCGAAACTGTGTTACAATAGATATGACAACCGTTACTGCTGACAATCAACCAACTGTGTAGCTATGGTTACCTTAAAGCTGACTACTAAACCTTCTTCTGCTGACCTTGTATTCCAACTGTCCCATCATGACAATCAGATTAATTTAGCTCAGTTTTCTTAGGGTGGAAATAGGCAAGGTAGAGGCAGACTTGGCTTTGGGTCGATGCAACCAATAACTGCACTAATCACAGAAGACTGCCAGGGCATACCAACCAGGCAATATGGTATTATCAGGTACTGTATCTGAATTCATTTATGCACAACTAGTAGGCTACCGTGTGGGATAGTTTTTAGATACCTTTGCTGTAGCAACTTCAGCCTCTGTAAAGGTGGCTAAAGTGACTAAGCGTTTATGTTATGCAACAAAAAGAGGCACTAAAAGCCCCAAAGAGCTGCATGGGCAACCCTGTGGTTAGTGGAAATATCTTAAGGGTACTGCTTCCATATAAAATTACAAGTCATAGCCTTATATTGTAGCCAGAGGTACTGTGGTAGATGACAATCAGATGAAACTAGTAGCAGGTACTGTACTATTCCAAGTTGCTGTGAATTAGGGTATAATTTAAATGCACATTGACATAGCTGTAGGCCCTGTATGAGGGACTCAAGCCTTGAAAGTTGAACGTTTCTGGTGATCTGTGTGTTGATGTTCAAATCAGGCAAAAGATAAAGGGAAAGCTTGAGAAAATtcttatgcccccccccccccccccccatctcttaaAAAAAATGCTTTAAAGTGATCTTGAATGGGAATGAGGGTTTTATAGTTTGCCTTATACATGAATATATTGAACCTTCTTTTTGAGATGATTTTTCCTtctttttacttatctattgatCTCTAAAAACATTTTTCAGATCTGAGCGAGCCGACACCCGCATAGCTGTTGTTTTTGCAGTGTTGGAGGAGGAACTTGGGGCTCTATTCAACCCGTATCACCGAAGTTCAGCTTTGTAGTGTGATTGAAATGCAAAGGCATGTTCGCGCTTTAGCGGCAaccgcattcacggtaaacgctacATGTCGGCCCAATTGGAAATGACCTTTTACATTTCTATCGCTGAATCTGCAACCAGAAATAGCTATTGGTTTTCTGGTTCGTTAAAAGAGCTAAACTTAGATATGTTTTTGTTGGTTTGATAAATTAGACCATGCCCATTTCAAGCTTATCTTTCAAAAAAAAGTTACATCAGAATATTTAgccaagttagctggctaactcattgatcctatTTTGtagtattaccccccccccccccccccccccacagctttCGAAGTCCCTGATTTTAGACACAATTTGCTGTGTAGTTGCGTATCAGCCAGACTAGGTGGAATTGCATGAGCTGCCAATTCCGCAAGCTGCTCCAAGCATAACTggtgccacgttcaaaacaactgggaacttggaaatgTCCAACTTCAGTGTATTCAAAACAACTGaactcgt

Function

symbol description
fam234a Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human FAM234A (family with sequence similarity 234 member A).

NR:

description
protein FAM234A

GO: NA

KEGG:

id description
K17258 ITFG3; integrin alpha FG-GAP repeat containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565119.2 False 3341 mRNA 0.49 12 20339109 20346615
XM_021565120.2 False 3223 mRNA 0.50 12 20339109 20346645
XM_036946457.1 True 3346 mRNA 0.49 12 20339109 20347491

Neighbor

gene id symbol gene type direction distance location
LOC110491567 LOC106579249 coding downstream 5080 20330400 ~ 20334029 (-)
LOC110491568 NA coding downstream 52145 20285809 ~ 20286964 (-)
kcnj12a LOC106579252 coding downstream 171467 20153681 ~ 20167642 (-)
med24 med24 coding downstream 214575 20083758 ~ 20124534 (-)
top2a top2a coding downstream 285020 20030374 ~ 20054089 (-)
LOC110491569 LOC106579243 coding upstream 6391 20353882 ~ 20366564 (-)
LOC110491577 LOC106579241 coding upstream 113633 20461124 ~ 20469565 (-)
LOC110491584 cxb5 coding upstream 276397 20623888 ~ 20625318 (-)
znf668 znf668 coding upstream 278245 20625736 ~ 20629535 (-)
LOC110491585 NA coding upstream 293005 20640226 ~ 20650176 (-)
G1351816 NA non-coding downstream 26675 20311425 ~ 20312434 (-)
G1351804 dnah3 non-coding downstream 57853 20280826 ~ 20281256 (-)
G1351802 NA non-coding downstream 58342 20280427 ~ 20280767 (-)
G1351801 NA non-coding downstream 58743 20280098 ~ 20280366 (-)
G1351798 NA non-coding downstream 62354 20276531 ~ 20276755 (-)
G1351830 NA non-coding upstream 27761 20375252 ~ 20375533 (-)
G1351832 LOC106579242 non-coding upstream 30065 20377556 ~ 20386225 (-)
G1351844 LOC106579242 non-coding upstream 47091 20394582 ~ 20402250 (-)
G1351848 NA non-coding upstream 57101 20404592 ~ 20404827 (-)
G1351852 NA non-coding upstream 67681 20415172 ~ 20415404 (-)
LOC110491553 LOC106579383 other downstream 641451 19691616 ~ 19697840 (-)
G1349896 NA other downstream 877294 19461041 ~ 19461815 (-)
LOC110491541 LOC106579266 other downstream 1014055 19310970 ~ 19325094 (-)
G1349366 NA other downstream 1704704 18634031 ~ 18634405 (-)
h3f3d LOC107388308 other upstream 473208 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 861972 21209463 ~ 21210794 (-)
si:ch211-183d21.3 LOC106579210 other upstream 913573 21255836 ~ 21288348 (-)
capn15 LOC106579196 other upstream 1332938 21640601 ~ 21725046 (-)

Expression


Co-expression Network