LOC110491569 (LOC106579243)


Basic Information

Item Value
gene id LOC110491569
gene name LOC106579243
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 20353882 ~ 20366564 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565117.2
cagagagtgacagagagagcaggaacAGGATCAAGAAAGCTGCTGCCACACTGAACGAGACACATTTCTCAACTTTGGTATAAATATGTTGGACTTTTTGATttactaaaataacacatatatCTAATAGAAGGCTAAATCAGAGGCCACTAACTTTTTCCTGATTTTGTTTGTTTACCTTTTGTTTGGTGAACCAGTGGATTTCGGGTCAAGGGTTGGAGGAAAACCCAGATATCTGTCACGTAACAGTCGCATGATGACAGACGTCTCACGATATCTTATCAATCACCTGGTGACGTTCTCCCTGCAGGATGGGGAGGTGAATAGTGTGGATGAGGCCCAGTCTCGTCTGTCCCGACTGGCCCGGGCGGAGAAGCTGTGGAGCCAGCAGATAGTTCTGGAGATTAGCCCTGAGGCCCTCCGactcagagacacacagagccagGATGAGTTGGAGAAGTATCCAGTTGCATCTATCCATCGCTGTGACGCCATCCTCACTGAGAAACGATTTCCATCCCTCCTGTTACTCGTTTGCCAAAGCGCACCTCAGATAAAGCCTGACGTTCTCTTCTTCAACTGTGAGACCGTAAGGGCAGAGCAAATTCGTGACGACATCACAAGGGCAGTGTCAGGTTACTCATCGAGGTCCAAGAAGCGCCCAGAGGCCCTCAGACTTCCTCCGATAGACCCTGTTCTTCCTCAAAATACCAAAGCAGCGATGATGGACCCCTACGGAATTCCGAGTCCCCCCATTCCACATGCTCCCAATGCCCCGCCTGCCAACCCTCCACCCTACCCAGGAATCAGAGCGAATGGCGTCAACAGCGGGCAACCACCTGATAGCTCTTTTCTACGAGCTGAGAAAGAAGTGGGGATCCTTAATCACTGTTTCGATGACATTGAGGTCTTCATGGCAAAGCTCCAGCAGACTGCAGAAGCTGCCTCAGTTTTAAgccagaggaagaagaagaagaaaagtcGCAAGCAAACAGCAGAGGAGGACTTGCTTACTGCAAAAGCTCGCCCTCCACCTGAAGAAGAATTCATGGACATCTTCCAAAAATTGAAATACTGCTTCAGCCTACTGGCTCGTCTCAAGTCTTCCATCTCCAACCCATCCTCAGAGGAGCTGCTCCACCATGTGTTCAAACCTCTGGATATGCTGGTGAGGACTACCGGGGGCCCTGCCCTAGGGGCCTCAGTGACCAGTCCTGCCCTGACCAACTCAGCCGTAACCCTGCTTCAAGACAAcctgtctgaggaggagaggctgCTATGGACGGCTCTGGGGCCCCACTGGACACTCCCACGttccCAGCTCAAAGGGCCAGTGGCCGCATATACACCGGTATTTCTGGACGGGTGGAAGCCAGAGGCCTCCAGGGCAGACAGGCAGGTTTATGAGGATCCAGTTGAGTCACAACACAAACATGAAGCCCTGAGAGAAAAACAAGAGtTGCAGCCTACTCAGCCAGTTGGACCTCCAGTCACCCCTAAGAGCAATGAAATGGATAGCAGTGTCCTACCCCCCGAGGGAGAGAGGATGTACAGTTGCAGCTATGACTTTGTGGCCCGCAACAACAGTGAGCTGTCAGTACAACAGGGAGATACACTGGAGGTCGTGGAGTCTTCCAAACGCTGGTGGAAGTGTCGTAATCGCTTCAACGAGGTTGGCTTTGTCCCATTCAACATCCTGGAGCCAATGGCTCACATAGACAGCCCTGTCACCATGAGAGAACCTAAGCCTCCGGTCTCACCTGCCCTGACCAAGACTCACATTCCACCCAGCCCTCCAGCCTTTAACCCTAGCTCCTTGACTCCTAGCCCCTCAGCGCACCACCGCCCTCGCCCACTATCATACAACCAATACAGCCAACACATTCCAGCCGGAGATGACGCAGACAAAGTCATGATGGTGAATGACGAACTGCTCCAGAGACTGACCAATGGGAAGGCCAACCTGAACAAGCCACTGGTCATCCCTCGCTCGTCGGACACCTTGGTCCCCCTGGACTACAACTCACCCCCCGAGGAGGTGGAGCAGTGGCTCAGGGGCAAGGGCTTCAGTGAGACGACGGTGACATTACTGGGAAAGCTGACAGGAGCCCTGCTCTTCTCTCTGAACAAAGAGGACCTACGACAAGTCCTACCAGACGAGGGCGCCAGAGTGTACAGCCAGCTCACTGTGCAGAAAGCACTGTTGGAGGACGCCCGGAAGGCCACTGAGCTGGAGGCAGTGATGGAAAAACAGAAGATGAAGATGGATCTGAAGCTGGAGAGTAGCACACTATAAGACCCACGTTTCAGACATCATGTGTCACTCCCCCATAAGGAAGACTCCAACTTAAAGAGAAAAAAGCCCGCACCACTGGCTTGATTCTAACAAACATTCAAAAACTGTCAGATGTAACATTATGCAAATATTCATTTTATGGTTGCTCTTCAAGCCAGGCTGTGCAGTCTTGAATCAaggctttgtttttttgttgcaaatgCTTGCTTCGGTTAAAACTTTTTAGGATAAATTGTCCTCTGTTAAGCCAATGTACAATTACACTTAGGCCCTGAGCAATGATCTCAGGCAAATAGATTAATACAATTCTGGGATTTTTATTCAGGCTTCAGAGAAAATCATCTTCTAGCAAAATAATGCAAACAGACCAAACCAATACTAGAGCTGGCACCCATTAGGAAAAGTTATGCATTCCTTTATGTGTTTGCATCCAATTTCAAGTGACTGACATACATGAACCAACATATTCAGAAGATGTACAAGCTGCGGATTCAGCATCAAAATACTGGAAAGTAAAATGAACATAAACGGGTACTTAGGATATTGTTCCCAGCACCAGGTGTCATAGTCCAAAACCAGGGTAACGTAACTCACTACCTGGGTAACGTAGCTGACTTGCTGGGTAACATAGCTGACTTCTAGGGTCACATACAGTCATTCTCAATCCAAAACAGCATTTCCTACTCAATCCATTGGAGACATGCAAAGTCCATCATGTCTACTACACAAACATAGACTTCACATGACATGAAAACTTGGAACAAACTTGTaaaattctaaaaaaaaaaataaa
>XM_021565118.2
cagagagtgacagagagagcaggaacAGGATCAAGAAAGCTGCTGCCACACTGAACGAGACACATTTCTCAACTTTGTGGATTTCGGGTCAAGGGTTGGAGGAAAACCCAGATATCTGTCACGTAACAGTCGCATGATGACAGACGTCTCACGATATCTTATCAATCACCTGGTGACGTTCTCCCTGCAGGATGGGGAGGTGAATAGTGTGGATGAGGCCCAGTCTCGTCTGTCCCGACTGGCCCGGGCGGAGAAGCTGTGGAGCCAGCAGATAGTTCTGGAGATTAGCCCTGAGGCCCTCCGactcagagacacacagagccagGATGAGTTGGAGAAGTATCCAGTTGCATCTATCCATCGCTGTGACGCCATCCTCACTGAGAAACGATTTCCATCCCTCCTGTTACTCGTTTGCCAAAGCGCACCTCAGATAAAGCCTGACGTTCTCTTCTTCAACTGTGAGACCGTAAGGGCAGAGCAAATTCGTGACGACATCACAAGGGCAGTGTCAGGTTACTCATCGAGGTCCAAGAAGCGCCCAGAGGCCCTCAGACTTCCTCCGATAGACCCTGTTCTTCCTCAAAATACCAAAGCAGCGATGATGGACCCCTACGGAATTCCGAGTCCCCCCATTCCACATGCTCCCAATGCCCCGCCTGCCAACCCTCCACCCTACCCAGGAATCAGAGCGAATGGCGTCAACAGCGGGCAACCACCTGATAGCTCTTTTCTACGAGCTGAGAAAGAAGTGGGGATCCTTAATCACTGTTTCGATGACATTGAGGTCTTCATGGCAAAGCTCCAGCAGACTGCAGAAGCTGCCTCAGTTTTAAgccagaggaagaagaagaagaaaagtcGCAAGCAAACAGCAGAGGAGGACTTGCTTACTGCAAAAGCTCGCCCTCCACCTGAAGAAGAATTCATGGACATCTTCCAAAAATTGAAATACTGCTTCAGCCTACTGGCTCGTCTCAAGTCTTCCATCTCCAACCCATCCTCAGAGGAGCTGCTCCACCATGTGTTCAAACCTCTGGATATGCTGGTGAGGACTACCGGGGGCCCTGCCCTAGGGGCCTCAGTGACCAGTCCTGCCCTGACCAACTCAGCCGTAACCCTGCTTCAAGACAAcctgtctgaggaggagaggctgCTATGGACGGCTCTGGGGCCCCACTGGACACTCCCACGttccCAGCTCAAAGGGCCAGTGGCCGCATATACACCGGTATTTCTGGACGGGTGGAAGCCAGAGGCCTCCAGGGCAGACAGGCAGGTTTATGAGGATCCAGTTGAGTCACAACACAAACATGAAGCCCTGAGAGAAAAACAAGAGtTGCAGCCTACTCAGCCAGTTGGACCTCCAGTCACCCCTAAGAGCAATGAAATGGATAGCAGTGTCCTACCCCCCGAGGGAGAGAGGATGTACAGTTGCAGCTATGACTTTGTGGCCCGCAACAACAGTGAGCTGTCAGTACAACAGGGAGATACACTGGAGGTCGTGGAGTCTTCCAAACGCTGGTGGAAGTGTCGTAATCGCTTCAACGAGGTTGGCTTTGTCCCATTCAACATCCTGGAGCCAATGGCTCACATAGACAGCCCTGTCACCATGAGAGAACCTAAGCCTCCGGTCTCACCTGCCCTGACCAAGACTCACATTCCACCCAGCCCTCCAGCCTTTAACCCTAGCTCCTTGACTCCTAGCCCCTCAGCGCACCACCGCCCTCGCCCACTATCATACAACCAATACAGCCAACACATTCCAGCCGGAGATGACGCAGACAAAGTCATGATGGTGAATGACGAACTGCTCCAGAGACTGACCAATGGGAAGGCCAACCTGAACAAGCCACTGGTCATCCCTCGCTCGTCGGACACCTTGGTCCCCCTGGACTACAACTCACCCCCCGAGGAGGTGGAGCAGTGGCTCAGGGGCAAGGGCTTCAGTGAGACGACGGTGACATTACTGGGAAAGCTGACAGGAGCCCTGCTCTTCTCTCTGAACAAAGAGGACCTACGACAAGTCCTACCAGACGAGGGCGCCAGAGTGTACAGCCAGCTCACTGTGCAGAAAGCACTGTTGGAGGACGCCCGGAAGGCCACTGAGCTGGAGGCAGTGATGGAAAAACAGAAGATGAAGATGGATCTGAAGCTGGAGAGTAGCACACTATAAGACCCACGTTTCAGACATCATGTGTCACTCCCCCATAAGGAAGACTCCAACTTAAAGAGAAAAAAGCCCGCACCACTGGCTTGATTCTAACAAACATTCAAAAACTGTCAGATGTAACATTATGCAAATATTCATTTTATGGTTGCTCTTCAAGCCAGGCTGTGCAGTCTTGAATCAaggctttgtttttttgttgcaaatgCTTGCTTCGGTTAAAACTTTTTAGGATAAATTGTCCTCTGTTAAGCCAATGTACAATTACACTTAGGCCCTGAGCAATGATCTCAGGCAAATAGATTAATACAATTCTGGGATTTTTATTCAGGCTTCAGAGAAAATCATCTTCTAGCAAAATAATGCAAACAGACCAAACCAATACTAGAGCTGGCACCCATTAGGAAAAGTTATGCATTCCTTTATGTGTTTGCATCCAATTTCAAGTGACTGACATACATGAACCAACATATTCAGAAGATGTACAAGCTGCGGATTCAGCATCAAAATACTGGAAAGTAAAATGAACATAAACGGGTACTTAGGATATTGTTCCCAGCACCAGGTGTCATAGTCCAAAACCAGGGTAACGTAACTCACTACCTGGGTAACGTAGCTGACTTGCTGGGTAACATAGCTGACTTCTAGGGTCACATACAGTCATTCTCAATCCAAAACAGCATTTCCTACTCAATCCATTGGAGACATGCAAAGTCCATCATGTCTACTACACAAACATAGACTTCACATGACATGAAAACTTGGAACAAACTTGTaaaattctaaaaaaaaaaataaa

Function

NR:

description
epidermal growth factor receptor kinase substrate 8-like protein 1

GO: NA

KEGG:

id description
K17277 EPS8; epidermal growth factor receptor kinase substrate 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565117.2 False 3089 mRNA 0.49 19 20353882 20366564
XM_021565118.2 True 2969 mRNA 0.50 20 20353882 20366564

Neighbor

gene id symbol gene type direction distance location
fam234a fam234a coding downstream 6391 20339109 ~ 20347491 (-)
LOC110491567 LOC106579249 coding downstream 19853 20330400 ~ 20334029 (-)
LOC110491568 NA coding downstream 66918 20285809 ~ 20286964 (-)
kcnj12a LOC106579252 coding downstream 186240 20153681 ~ 20167642 (-)
med24 med24 coding downstream 229348 20083758 ~ 20124534 (-)
LOC110491577 LOC106579241 coding upstream 94560 20461124 ~ 20469565 (-)
LOC110491584 cxb5 coding upstream 257324 20623888 ~ 20625318 (-)
znf668 znf668 coding upstream 259172 20625736 ~ 20629535 (-)
LOC110491585 NA coding upstream 273932 20640226 ~ 20650176 (-)
rnf40 rnf40 coding upstream 284801 20651365 ~ 20664781 (-)
G1351816 NA non-coding downstream 41448 20311425 ~ 20312434 (-)
G1351804 dnah3 non-coding downstream 72626 20280826 ~ 20281256 (-)
G1351802 NA non-coding downstream 73115 20280427 ~ 20280767 (-)
G1351801 NA non-coding downstream 73516 20280098 ~ 20280366 (-)
G1351798 NA non-coding downstream 77127 20276531 ~ 20276755 (-)
G1351830 NA non-coding upstream 8688 20375252 ~ 20375533 (-)
G1351832 LOC106579242 non-coding upstream 10992 20377556 ~ 20386225 (-)
G1351844 LOC106579242 non-coding upstream 28018 20394582 ~ 20402250 (-)
G1351848 NA non-coding upstream 38028 20404592 ~ 20404827 (-)
G1351852 NA non-coding upstream 48608 20415172 ~ 20415404 (-)
LOC110491553 LOC106579383 other downstream 656224 19691616 ~ 19697840 (-)
G1349896 NA other downstream 892067 19461041 ~ 19461815 (-)
LOC110491541 LOC106579266 other downstream 1028828 19310970 ~ 19325094 (-)
G1349366 NA other downstream 1719477 18634031 ~ 18634405 (-)
h3f3d LOC107388308 other upstream 454135 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 842899 21209463 ~ 21210794 (-)
si:ch211-183d21.3 LOC106579210 other upstream 894500 21255836 ~ 21288348 (-)
capn15 LOC106579196 other upstream 1313865 21640601 ~ 21725046 (-)

Expression


Co-expression Network