znf668 (znf668)


Basic Information

Item Value
gene id znf668
gene name znf668
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 20625736 ~ 20629535 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565139.2
TTCACTGTAAACGCAGTTATTGGGGCTTTATATCTGGACATTTTAACTGATCCCGAATGCCCGAAAGAAGATAAAAAAGCATCACAAGCATATAACTTAAAGGATGGCCTCTCCCCAGCCTGGCAGCCCACCACCTACAGAGCAAGACACCCCCCTTGCTGAACCGAGTGAGGAGAGCATAGAGCTGGAGGTAGAGGAGCCCCCTGTAAAAAAGAGAGGCAAAGGCAGACCTCCAAAGAAATCCAAGCATTCTTTCAAATGCTCTGCCTGCCAGGAGGCTTTCAGTAGCCCCGTGGCTCTCCGGAGCCATAAGCTGTCTGCCCACAGTAAGGAGCAGCAGGAGCAAAAACAGCACACATGCTCTCAGTGCAGCAAAACGTTCCCCAGCAGAGCCCAGCTCTCCAAGCATCAGCGCTCTCACTCTGCTCAGCGCCCCTTTCAGTGCGATCAGTGTCACAAGGCTTACAAGACCCCAACGGAGCTACGCAACCACAGCCGCTcccatacaggggagaagccttttgTCTGCACTGAATGTGGCAAGACCTTCATGCAGGCCATATGCCTGCGTATTCACATGACGCAGCACAGCGGCGAGCGGCCATATTCTTGCCCCCATTGCTCCAAGAGCTACCCCACTCTGTCCAAGTTGAAGGTGCACTTGCGCTCTCACACGGGGGAGAAGCCCTATTTTTGTGCCGAGTGCGGGAAGAGCTTTGCCGACCCCTCTGTTTACCGGAAGCACAGGCGCAACCACCAGGGCCACCGGCCCTACTCCTGTGATAAGTGTGGGAAGACGTACACTGAGCTGAAAGACCTGAAGAACCATGAACGgtctcacacaggagagaagccctacCTGTGTTCAGACTGCGGCAAGGCCTTCTCCCGTTCCTCCTCCCTGGCCTGTCACCTCCGCATTCACTCCCAGAGCAAACCTTACCAGTGTGAGCAGTGTGGCAAAGGCTTCACTCAGCTCTCCTCCTATCAGTCTCACCTGCGCACTCACTCGGGTGAGAAGCCATTCCTCTGCCCGCAGTGTGGGAAGATGTTCTCAGACCCCTCCAGTTTCCGCCGGCACCAGAGGGCCCATTCAGGGTTCAAGCCCTACCCCTGTGATAAGTGTGCCAAGAGATTCCGGCAGCCTGCCGACCTGGCCGTGCATCAGCGGGTGCACTCCGGGCAGCGGCCCTACAAGTGTCAGAGCTGCGACAAGGCGTTTGTGGCGTCCTGGGACCTGCGACGTCACATGCTGGTGCACACAGGGCTGCGGCCCTTCTCCTGCACGGAGTGCGGCAAGTCCTTTGCCGAGCGCTCCAGTCTCAACAAGCACCGAAGGGTGCACTCTGGCGAGCGCCCATTCAAATGTGACCTGTGCTTCAAGTCGTTCGTGGTCTCCTCCAGCCTACGGAAGCACGAGCGCACTCACCTGGCTGAGAGGCCTGCGCTGCTACCGCAGCAGGCGGTACCCGAGACAGTTGCAGCAGTCTTCCTCGCTCACACCTCCCTCCCCCAATTTTCCTGTTCACACTGTGACGTCACCTTTGGGACCTGGGAGGAGGTTCAGGCCCATGAGGCTCTTCACACCGTTTCCCCTCTTTCCACCACCGTGGCCCCCCTGCCCATGGGCCCACACGTGTGCGCCACCTGCCGGGAGGAGTTTGTACTGCTGTCTGACCTGCAAGCCCACGAGAAGATGCACCCCAAACCGCGACCCCACGTCTGCGACAGCTGCGGCAAAGGTTTCCTCAACAAAGCCGGGTTGCGGAAACACCAGCGGATCCACTCGACCAACCGCAACCACGTCTGCCCCCACTGTAGCAAAGCCTTTCTGTTTGCCGCCTATCTCCGCAAGCACTTACGCACCCACCGCGACCCCCTGCCCACCTTCcccctctctgacacacacattgcacacacGGAGCCTCTTCCCTCGCCACCTCCACCCATTGAAGTTTCCTCGTCCACTCTTGAACCTGGTGCAATTTGTCTGACTATACCGGTGACGATTCCTGTGACTGTTCCTGTAACCTTTCAGACCACGCCCATGTATATCGATAAGGAAGACCGACTCTGAAAAGACTGTAACTGTTTGTGTGGAATGAATTATGACTCAACAGCCAGATGCCTTGAATATTTTTAACAATAGTATGGTTATAAAACAAGCTTAATTCCCATCCTTAAACAAAGGTTATTGATAGCCTATTGATAACAATTTGAAATAATGAGACTTTTCACTTTAAATTGCCCTCAACTGTCTTGTGTGTAGGATGACATGTATTTGTGATTTAAAATGTGTTATTTATGCTATATAACGTACATTATGTTTTATACTATACGATACCTGACATCTGTCATCAACTTATTTCAAATTTCATTGTCATGATTTGTTCATAAGAATGTATTGTTTTGTGTCATAggctatacactgagtataccaaatatTAGGAAGACCTTCCtaaattgagttgcaccccccccccgtttgccctcagaacagtctcaatttgtcagccatggactctacaaggtgtcgaaagcgtttcacaggggatgctggcccatgatgactccaatgcttcccacagttgtgtcaagttggctggatgatgggtggtggaccattcttgatacaaacgagaaactgttgagagtgaaaaacccagcagcgttgcagttcttgacacaaaccggtacaCCTCACACCTAttaccatactctgttcaaaggcaacttaaatattttgtcttgcccattcaccctctgaatggcacacgtacacaatccatgtctcaaggcttaaaaatcattctttaacatgtctcctcccctccatcttcactgatttaaagtggatttaacaagtgacatcaataagggatcataggtgTTCTTAATTTTTTGTGAACTCAGTGTATATTGATTAGTGTGTAGGCTAAACTACTAATCTTAATTCCACGGTTAGGTCATTTATGTCTAAACATAGGCTATAACATTGTTTGAGTCATGATATTAagtcatgtttttttccccccatggACTGTTGGGTATTTTGATTTCTATTCACTTCTCGTAATTTTTGCGATGGAATATGTAAGTAAACAATTGACTTAATAGCA
>XM_036946470.1
GCTCGAGAATAGCGCTCTCGTCATGGTCCTAAAGCCGTCCTCCTCCACCAACACCAATCATAGGGCTTCACTGTAAACGCAGTTATTGGGGCTTTATATCTGGACATTTTAACTGATCCCGAATGCCCGAAAGAAGATAAAAAGCATCACAAGCATATAACTTAAAGGATGGCCTCTCCCCAGCCTGGCAGCCCACCACCTACAGAGCAAGACACCCCCCTTGCTGAACCGAGTGAGGAGAGCATAGAGCTGGAGGTAGAGGAGCCCCCTGTAAAAAAGAGAGGCAAAGGCAGACCTCCAAAGAAATCCAAGCATTCTTTCAAATGCTCTGCCTGCCAGGAGGCTTTCAGTAGCCCCGTGGCTCTCCGGAGCCATAAGCTGTCTGCCCACAGTAAGGAGCAGCAGGAGCAAAAACAGCACACATGCTCTCAGTGCAGCAAAACGTTCCCCAGCAGAGCCCAGCTCTCCAAGCATCAGCGCTCTCACTCTGCTCAGCGCCCCTTTCAGTGCGATCAGTGTCACAAGGCTTACAAGACCCCAACGGAGCTACGCAACCACAGCCGCTcccatacaggggagaagccttttgTCTGCACTGAATGTGGCAAGACCTTCATGCAGGCCATATGCCTGCGTATTCACATGACGCAGCACAGCGGCGAGCGGCCATATTCTTGCCCCCATTGCTCCAAGAGCTACCCCACTCTGTCCAAGTTGAAGGTGCACTTGCGCTCTCACACGGGGGAGAAGCCCTATTTTTGTGCCGAGTGCGGGAAGAGCTTTGCCGACCCCTCTGTTTACCGGAAGCACAGGCGCAACCACCAGGGCCACCGGCCCTACTCCTGTGATAAGTGTGGGAAGACGTACACTGAGCTGAAAGACCTGAAGAACCATGAACGgtctcacacaggagagaagccctacCTGTGTTCAGACTGCGGCAAGGCCTTCTCCCGTTCCTCCTCCCTGGCCTGTCACCTCCGCATTCACTCCCAGAGCAAACCTTACCAGTGTGAGCAGTGTGGCAAAGGCTTCACTCAGCTCTCCTCCTATCAGTCTCACCTGCGCACTCACTCGGGTGAGAAGCCATTCCTCTGCCCGCAGTGTGGGAAGATGTTCTCAGACCCCTCCAGTTTCCGCCGGCACCAGAGGGCCCATTCAGGGTTCAAGCCCTACCCCTGTGATAAGTGTGCCAAGAGATTCCGGCAGCCTGCCGACCTGGCCGTGCATCAGCGGGTGCACTCCGGGCAGCGGCCCTACAAGTGTCAGAGCTGCGACAAGGCGTTTGTGGCGTCCTGGGACCTGCGACGTCACATGCTGGTGCACACAGGGCTGCGGCCCTTCTCCTGCACGGAGTGCGGCAAGTCCTTTGCCGAGCGCTCCAGTCTCAACAAGCACCGAAGGGTGCACTCTGGCGAGCGCCCATTCAAATGTGACCTGTGCTTCAAGTCGTTCGTGGTCTCCTCCAGCCTACGGAAGCACGAGCGCACTCACCTGGCTGAGAGGCCTGCGCTGCTACCGCAGCAGGCGGTACCCGAGACAGTTGCAGCAGTCTTCCTCGCTCACACCTCCCTCCCCCAATTTTCCTGTTCACACTGTGACGTCACCTTTGGGACCTGGGAGGAGGTTCAGGCCCATGAGGCTCTTCACACCGTTTCCCCTCTTTCCACCACCGTGGCCCCCCTGCCCATGGGCCCACACGTGTGCGCCACCTGCCGGGAGGAGTTTGTACTGCTGTCTGACCTGCAAGCCCACGAGAAGATGCACCCCAAACCGCGACCCCACGTCTGCGACAGCTGCGGCAAAGGTTTCCTCAACAAAGCCGGGTTGCGGAAACACCAGCGGATCCACTCGACCAACCGCAACCACGTCTGCCCCCACTGTAGCAAAGCCTTTCTGTTTGCCGCCTATCTCCGCAAGCACTTACGCACCCACCGCGACCCCCTGCCCACCTTCcccctctctgacacacacattgcacacacGGAGCCTCTTCCCTCGCCACCTCCACCCATTGAAGTTTCCTCGTCCACTCTTGAACCTGGTGCAATTTGTCTGACTATACCGGTGACGATTCCTGTGACTGTTCCTGTAACCTTTCAGACCACGCCCATGTATATCGATAAGGAAGACCGACTCTGAAAAGACTGTAACTGTTTGTGTGGAATGAATTATGACTCAACAGCCAGATGCCTTGAATATTTTTAACAATAGTATGGTTATAAAACAAGCTTAATTCCCATCCTTAAACAAAGGTTATTGATAGCCTATTGATAACAATTTGAAATAATGAGACTTTTCACTTTAAATTGCCCTCAACTGTCTTGTGTGTAGGATGACATGTATTTGTGATTTAAAATGTGTTATTTATGCTATATAACGTACATTATGTTTTATACTATACGATACCTGACATCTGTCATCAACTTATTTCAAATTTCATTGTCATGATTTGTTCATAAGAATGTATTGTTTTGTGTCATAggctatacactgagtataccaaatatTAGGAAGACCTTCCtaaattgagttgcaccccccccccgtttgccctcagaacagtctcaatttgtcagccatggactctacaaggtgtcgaaagcgtttcacaggggatgctggcccatgatgactccaatgcttcccacagttgtgtcaagttggctggatgatgggtggtggaccattcttgatacaaacgagaaactgttgagagtgaaaaacccagcagcgttgcagttcttgacacaaaccggtacaCCTCACACCTAttaccatactctgttcaaaggcaacttaaatattttgtcttgcccattcaccctctgaatggcacacgtacacaatccatgtctcaaggcttaaaaatcattctttaacatgtctcctcccctccatcttcactgatttaaagtggatttaacaagtgacatcaataagggatcataggtgTTCTTAATTTTTTGTGAACTCAGTGTATATTGATTAGTGTGTAGGCTAAACTACTAATCTTAATTCCACGGTTAGGTCATTTATGTCTAAACATAGGCTATAACATTGTTTGAGTCATGATATTAagtcatgtttttttccccccatggACTGTTGGGTATTTTGATTTCTATTCACTTCTCGTAATTTTTGCGATGGAATATGTAAGTAAACAATTGACTTAATAGCA

Function

symbol description
znf668 Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF668 (zinc finger protein 668).

NR:

description
zinc finger protein 668

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565139.2 False 3119 mRNA 0.51 2 20625736 20629469
XM_036946470.1 True 3184 mRNA 0.51 2 20625736 20629535

Neighbor

gene id symbol gene type direction distance location
LOC110491584 cxb5 coding downstream 418 20623888 ~ 20625318 (-)
LOC110491577 LOC106579241 coding downstream 156171 20461124 ~ 20469565 (-)
LOC110491569 LOC106579243 coding downstream 259172 20353882 ~ 20366564 (-)
fam234a fam234a coding downstream 278245 20339109 ~ 20347491 (-)
LOC110491567 LOC106579249 coding downstream 291707 20330400 ~ 20334029 (-)
LOC110491585 NA coding upstream 10961 20640226 ~ 20650176 (-)
rnf40 rnf40 coding upstream 21830 20651365 ~ 20664781 (-)
ccdc189 ccdc189 coding upstream 49623 20679158 ~ 20681587 (-)
ube2ib ube2i coding upstream 94900 20724435 ~ 20733606 (-)
kctd5b LOC106579229 coding upstream 109266 20738801 ~ 20772291 (-)
G1351980 NA non-coding downstream 22108 20599284 ~ 20603628 (-)
G1351978 NA non-coding downstream 24679 20597145 ~ 20601057 (-)
G1351951 NA non-coding downstream 38981 20584019 ~ 20586755 (-)
G1351859 NA non-coding downstream 200578 20424928 ~ 20425158 (-)
G1351854 NA non-coding downstream 208556 20416876 ~ 20417180 (-)
G1351994 NA non-coding upstream 44413 20673948 ~ 20729877 (-)
G1351925 NA non-coding upstream 53413 20682948 ~ 20687423 (-)
G1352021 NA non-coding upstream 117094 20746629 ~ 20748225 (-)
G1352051 NA non-coding upstream 202110 20831645 ~ 20831870 (-)
G1352113 NA non-coding upstream 317743 20947278 ~ 20947694 (-)
LOC110491553 LOC106579383 other downstream 928078 19691616 ~ 19697840 (-)
G1349896 NA other downstream 1163921 19461041 ~ 19461815 (-)
LOC110491541 LOC106579266 other downstream 1300682 19310970 ~ 19325094 (-)
G1349366 NA other downstream 1991331 18634031 ~ 18634405 (-)
h3f3d LOC107388308 other upstream 191164 20820699 ~ 20823171 (-)
G1352220 LOC106582599 other upstream 579928 21209463 ~ 21210794 (-)
si:ch211-183d21.3 LOC106579210 other upstream 631529 21255836 ~ 21288348 (-)
capn15 LOC106579196 other upstream 1050894 21640601 ~ 21725046 (-)

Expression


Co-expression Network