XLOC_003234 (CR847563.1)


Basic Information

Item Value
gene id XLOC_003234
gene name CR847563.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 8578054 ~ 8580557 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006379
ATGGATCAAAGTGTCAGTGCAACCGTTTCAGCATCTACCGGTGCAGGAGCAACAACATCGAGGTCCACCGCCATAACGCAGCCGACGATAATGGGGGCCTTCAGCAAAACAATACAGTACAAAAGGGACAGTGCCCGTTGGAAAACCTGTACTGATGCAGTAACTAAATACTTGGCAAAGGAAATGGTTTCTTTctacactgtagaaaaaaaatcatttaaggaCATGGTAAAGGTCCTAGATGCCCAGTACGAGCTGCCTGGACGGAAATTTTTCTCACAAACAGCCGTCCCACAATTATATAGTAAAGTTAGAGACGATGTTCAAGTGCTGCTATCAGCGGCAGACAGTTATTCTTTAACAACTGACATGTGGTCGTCAGTTAACATGACACCATATATGTCTCTGACTGTCCATATTATTACACCTGACTGGAAACTTGAATCCAAATGTCTCCAAACTACGTATTTTCCAGAGAGTCATACGGCGGACAATCTAGCTGCGACGCTTACAGCTGCACTTCAAGAATGGCAACTTGACGAGAAAAAACTCTCAGCCATAACCACTGACAACGCTGCCAACATTCATGCCGCAATCAGGTCCCTGCATTGGCCGTGGCTTAATTGCTTTGGTCACAATCTAAACTTGGCTGTCACAAATGGATTGCACGACCAGAAGCAAAAAACCGAGCGCACCCTCGGACTATGCCGTAATATTGTCGGGGCCTTTTCACACAGCTGGCAACGTAAGCATGAACTCCACAAGAAGCAAGTGGACTTGGGTCTCCCAAAACATAGTCTCGTAACGGACTGCGCAACTCGCTGGGGCTCCAAACTGGCAATGGTGGAGCGCATCCTCGAGCAGGCCCAAGCGATCAGACACGTCCTGTCTGATGACAGAAGGAGCAGCCTGTCCCTGACCTGGCAGGACATGGACGTCTTGAAAGCTATTCACGAAGCACTGAAACCAGTCGGTGACTTCACTGATATTTTGTCAGGAGAAAATTATGTGACCAGTTCCTGTATCCTCCCCATACTACAGCTCTGCAGGGACAATGTTTTGGCTGCGTCAGAAAATGACCTTCAGCTAACAAAGTCAATCAAAACTGGAATTCTAACAAAGCTGGAGGCCAAGTATGAATCCAGTTCAGTGCGCAAAATATTGCGAAAATGCACTTTCCTCGACCCGCGTTACCGCGGAGGATATGAGGCAGATGACAACGCATTGGCTGAGACAAAGGCTGAATTACAGGCTGAGATCGTCAGCTTAGAGGCAGCAGGTCCAGTGGCCATAAGAGTGGAAGAGGGAGAGGCGCAACTAGAACCCTTACGAAAAAAAATGACTCTGGGAAGTATGCTGCAAAAAAAACCTGATGCAATGGCAGGTGCCGTCGGCAGCGGCACCGTAGAAGACCGAGTCGGAGCTGAAATAACAGCTTACTGTTTGGAGCCAGTTACTCAAGGAGACGAGGACCCACTTCTTTGGTGGAAATCTGCTGCCGGGCGTTTTCCCCAGATGTCACGAGTGGCACGAAAATACCTGTGCGTCTGTGCCACAAGCACACCATCGGAACGGGTTTTCAGCACCGCAGGTAAAGTTGTCGGTCCACAACGTTCCCTGTTAAAGCCCGACAAAGTAAACATGCTGGTTTTTCTAGCGAAAAATATTGATTAG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095163

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006379 True 1674 lncRNA 0.48 2 8578054 8580557

Neighbor

gene id symbol gene type direction distance location
XLOC_003232 dnase2b coding upstream 398909 8170948 ~ 8179145 (+)
XLOC_003231 samd13 coding upstream 416905 8152872 ~ 8161149 (+)
XLOC_003230 prkacba coding upstream 427160 8129536 ~ 8150894 (+)
XLOC_003229 NA coding upstream 607024 7880142 ~ 7971030 (+)
XLOC_003228 NA coding upstream 751982 7825353 ~ 7826072 (+)
XLOC_003235 NA coding downstream 95412 8675969 ~ 8677720 (+)
XLOC_003236 CABZ01079837.1 coding downstream 930976 9511533 ~ 9522073 (+)
XLOC_003237 NA coding downstream 1021188 9601745 ~ 9603070 (+)
XLOC_003238 BX005472.1 coding downstream 1317956 9898513 ~ 9898630 (+)
XLOC_003239 CT990625.1 coding downstream 1954899 10535456 ~ 10537403 (+)
XLOC_003250 BX324177.11 misc downstream 2765246 11345803 ~ 11346099 (+)
XLOC_003255 BX324177.14 misc downstream 2792329 11372886 ~ 11373182 (+)
XLOC_003257 BX324177.13 misc downstream 2805805 11386362 ~ 11386658 (+)
XLOC_003260 BX324177.2 misc downstream 2837476 11418033 ~ 11418323 (+)
XLOC_003262 BX324177.15 misc downstream 2848836 11429393 ~ 11429689 (+)
XLOC_003227 CR450813.2 non-coding upstream 794740 7782514 ~ 7783314 (+)
XLOC_003224 NA non-coding upstream 1291744 7281239 ~ 7286310 (+)
XLOC_003218 CU929070.2 non-coding upstream 1427148 7150820 ~ 7150906 (+)
XLOC_003217 NA non-coding upstream 1426047 7149071 ~ 7152007 (+)

Expression


Co-expression Network