LOC118939472


Basic Information

Item Value
gene id LOC118939472
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23113394 ~ 23121852 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036389.1
catcaaccacctgagccactgcctgttcaccccgttatcatccagaagGGTAAACAGTCTGCCATCATGCAGTGGATGTTATTCCTAGTGCTGTTCTCAGTGACAGACGTAACAGAACCAGTAAACGGAACTATGACGACTGCCTCTACACCTGTTATGACAACAAGAG

Function

NR:

description
scavenger receptor cysteine-rich domain-containing group B protein-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036389.1 True 169 mRNA 0.48 3 23113394 23121852

Neighbor

gene id symbol gene type direction distance location
LOC110491656 dnaaf3 coding upstream 34908 23070791 ~ 23078486 (+)
syt5b LOC106579173 coding upstream 43395 23053857 ~ 23069999 (+)
zgc:56095 fri3 coding upstream 70239 23013832 ~ 23043155 (+)
si:dkey-197c15.6 LOC105030686 coding upstream 126225 22984913 ~ 22987169 (+)
fgf21 LOC106579352 coding upstream 230759 22877257 ~ 22882635 (+)
LOC110491658 LOC106579351 coding downstream 2438 23123859 ~ 23134383 (+)
LOC110491660 LOC106579168 coding downstream 86274 23208126 ~ 23213840 (+)
LOC110491663 LOC106579167 coding downstream 95561 23217413 ~ 23235290 (+)
LOC110491666 LOC106579166 coding downstream 126807 23248659 ~ 23264309 (+)
LOC110491669 LOC106579159 coding downstream 277544 23399396 ~ 23404624 (+)
G1353551 NA non-coding upstream 1126 23111906 ~ 23112268 (+)
G1353548 NA non-coding upstream 7577 23105472 ~ 23105817 (+)
G1353541 NA non-coding upstream 19399 23093726 ~ 23093995 (+)
G1353537 NA non-coding upstream 24258 23088913 ~ 23089136 (+)
G1353534 NA non-coding upstream 28089 23084979 ~ 23085305 (+)
G1353557 NA non-coding downstream 7800 23129652 ~ 23132102 (+)
G1353559 LOC105030617 non-coding downstream 11519 23133371 ~ 23133917 (+)
G1353618 NA non-coding downstream 84760 23206612 ~ 23207644 (+)
G1353519 NA other upstream 67510 23045269 ~ 23045884 (+)
G1353021 NA other upstream 481089 22631879 ~ 22632305 (+)
LOC110491629 LOC106579195 other upstream 1113143 21727617 ~ 22001169 (+)
G1351501 LOC106579196 other upstream 1432513 21679224 ~ 21680881 (+)
G1351366 LOC106579206 other upstream 1708277 21402227 ~ 21405117 (+)
G1353660 NA other downstream 176605 23298457 ~ 23298753 (+)
LOC110491671 LOC106579157 other downstream 358237 23430867 ~ 23488782 (+)
G1354668 NA other downstream 871766 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 963856 24085708 ~ 24090034 (+)

Expression


Co-expression Network