trnaw-cca-16


Basic Information

Item Value
gene id trnaw-cca-16
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23615480 ~ 23615551 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-16
GACCTCGTGCCGCAAAGGTAGcgtgtctgactccagatcagaaggttgcgtgttcaaatcacgtcgtggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-16 True 72 mRNA 0.57 1 23615480 23615551

Neighbor

gene id symbol gene type direction distance location
trnaw-cca-15 NA coding upstream 14039 23601370 ~ 23601441 (+)
trnaw-cca-14 NA coding upstream 15227 23600182 ~ 23600253 (+)
trnaw-cca-13 NA coding upstream 16415 23598994 ~ 23599065 (+)
trnaw-cca-12 NA coding upstream 17603 23597806 ~ 23597877 (+)
trnaw-cca-11 NA coding upstream 18791 23596618 ~ 23596689 (+)
trnaw-cca-17 NA coding downstream 864 23616415 ~ 23616486 (+)
trnaw-cca-18 NA coding downstream 2988 23618539 ~ 23618610 (+)
trnaw-cca-19 NA coding downstream 5118 23620669 ~ 23620740 (+)
trnaw-cca-20 NA coding downstream 6308 23621859 ~ 23621930 (+)
trnaw-cca-21 NA coding downstream 7497 23623048 ~ 23623119 (+)
G1354136 NA non-coding upstream 108664 23505186 ~ 23506816 (+)
G1354115 NA non-coding upstream 154963 23454181 ~ 23460517 (+)
G1354114 NA non-coding upstream 156108 23453127 ~ 23459372 (+)
G1354084 LOC106579160 non-coding upstream 220448 23390762 ~ 23395032 (+)
G1354081 NA non-coding upstream 229311 23385804 ~ 23386169 (+)
G1354215 NA non-coding downstream 88348 23703899 ~ 23712056 (+)
G1354168 NA non-coding downstream 166898 23782449 ~ 23784110 (+)
G1354281 NA non-coding downstream 212351 23827902 ~ 23916365 (+)
G1354286 NA non-coding downstream 219308 23834859 ~ 23859610 (+)
G1354172 NA non-coding downstream 235772 23851323 ~ 23856448 (+)
LOC110491671 LOC106579157 other upstream 126868 23430867 ~ 23488782 (+)
G1353660 NA other upstream 316727 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 489169 23123859 ~ 23134383 (+)
G1353519 NA other upstream 569596 23045269 ~ 23045884 (+)
G1353021 NA other upstream 983175 22631879 ~ 22632305 (+)
G1354668 NA other downstream 378067 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 470157 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 1054888 24670341 ~ 24681115 (+)
G1355273 NA other downstream 1065863 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 1149088 24764607 ~ 24783513 (+)

Expression


Co-expression Network