trnaw-cca-20


Basic Information

Item Value
gene id trnaw-cca-20
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23621859 ~ 23621930 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-20
gacctcgtggcgcaaaggtagcgcgtctgactccagagcagaaggttgtgtgttcaaatCACATCGTGGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-20 True 72 mRNA 0.57 1 23621859 23621930

Neighbor

gene id symbol gene type direction distance location
trnaw-cca-19 NA coding upstream 1119 23620669 ~ 23620740 (+)
trnaw-cca-18 NA coding upstream 3249 23618539 ~ 23618610 (+)
trnaw-cca-17 NA coding upstream 5373 23616415 ~ 23616486 (+)
trnaw-cca-16 NA coding upstream 6308 23615480 ~ 23615551 (+)
trnaw-cca-15 NA coding upstream 20418 23601370 ~ 23601441 (+)
trnaw-cca-21 NA coding downstream 1118 23623048 ~ 23623119 (+)
trnaw-cca-22 NA coding downstream 2306 23624236 ~ 23624307 (+)
trnaw-cca-23 NA coding downstream 3498 23625428 ~ 23625499 (+)
trnaw-cca-24 NA coding downstream 4690 23626620 ~ 23626691 (+)
trnaw-cca-25 NA coding downstream 5882 23627812 ~ 23627883 (+)
G1354199 NA non-coding upstream 957 23597617 ~ 23620902 (+)
G1354136 NA non-coding upstream 115043 23505186 ~ 23506816 (+)
G1354115 NA non-coding upstream 161342 23454181 ~ 23460517 (+)
G1354114 NA non-coding upstream 162487 23453127 ~ 23459372 (+)
G1354084 LOC106579160 non-coding upstream 226827 23390762 ~ 23395032 (+)
G1354215 NA non-coding downstream 81969 23703899 ~ 23712056 (+)
G1354168 NA non-coding downstream 160519 23782449 ~ 23784110 (+)
G1354281 NA non-coding downstream 205972 23827902 ~ 23916365 (+)
G1354286 NA non-coding downstream 212929 23834859 ~ 23859610 (+)
G1354172 NA non-coding downstream 229393 23851323 ~ 23856448 (+)
LOC110491671 LOC106579157 other upstream 133247 23430867 ~ 23488782 (+)
G1353660 NA other upstream 323106 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 495548 23123859 ~ 23134383 (+)
G1353519 NA other upstream 575975 23045269 ~ 23045884 (+)
G1353021 NA other upstream 989554 22631879 ~ 22632305 (+)
G1354668 NA other downstream 371688 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 463778 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 1048509 24670341 ~ 24681115 (+)
G1355273 NA other downstream 1059484 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 1142709 24764607 ~ 24783513 (+)

Expression


Co-expression Network