trnar-ccu-49


Basic Information

Item Value
gene id trnar-ccu-49
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23632541 ~ 23632612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnar-ccu-49
GACCTCGTGCCGCAAAGGTAGCGTGTCTGACTCctgatcagaaggttgcgtgttcaaatcacgtcgtggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnar-ccu-49 True 72 mRNA 0.54 1 23632541 23632612

Neighbor

gene id symbol gene type direction distance location
trnaw-cca-28 NA coding upstream 1117 23631353 ~ 23631424 (+)
trnaw-cca-27 NA coding upstream 2280 23630190 ~ 23630261 (+)
trnaw-cca-26 NA coding upstream 3470 23629000 ~ 23629071 (+)
trnaw-cca-25 NA coding upstream 4658 23627812 ~ 23627883 (+)
trnaw-cca-24 NA coding upstream 5850 23626620 ~ 23626691 (+)
trnaw-cca-29 NA coding downstream 1112 23633724 ~ 23633795 (+)
trnaw-cca-30 NA coding downstream 2300 23634912 ~ 23634983 (+)
trnar-ccu-50 NA coding downstream 3487 23636099 ~ 23636170 (+)
trnar-ccu-51 NA coding downstream 4675 23637287 ~ 23637358 (+)
trnaw-cca-31 NA coding downstream 5864 23638476 ~ 23638547 (+)
G1354199 NA non-coding upstream 11639 23597617 ~ 23620902 (+)
G1354136 NA non-coding upstream 125725 23505186 ~ 23506816 (+)
G1354115 NA non-coding upstream 172024 23454181 ~ 23460517 (+)
G1354114 NA non-coding upstream 173169 23453127 ~ 23459372 (+)
G1354084 LOC106579160 non-coding upstream 237509 23390762 ~ 23395032 (+)
G1354215 NA non-coding downstream 71287 23703899 ~ 23712056 (+)
G1354168 NA non-coding downstream 149837 23782449 ~ 23784110 (+)
G1354281 NA non-coding downstream 195290 23827902 ~ 23916365 (+)
G1354286 NA non-coding downstream 202247 23834859 ~ 23859610 (+)
G1354172 NA non-coding downstream 218711 23851323 ~ 23856448 (+)
LOC110491671 LOC106579157 other upstream 143929 23430867 ~ 23488782 (+)
G1353660 NA other upstream 333788 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 506230 23123859 ~ 23134383 (+)
G1353519 NA other upstream 586657 23045269 ~ 23045884 (+)
G1353021 NA other upstream 1000236 22631879 ~ 22632305 (+)
G1354668 NA other downstream 361006 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 453096 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 1037827 24670341 ~ 24681115 (+)
G1355273 NA other downstream 1048802 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 1132027 24764607 ~ 24783513 (+)

Expression


Co-expression Network