trnaw-cca-29


Basic Information

Item Value
gene id trnaw-cca-29
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23633724 ~ 23633795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-29
GACCTCGTGCCGCAAAGGTAGcgtgtctgactccagatcagaaggttgcgtgttcaaatcacgtcgtggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-29 True 72 mRNA 0.54 1 23633724 23633795

Neighbor

gene id symbol gene type direction distance location
trnar-ccu-49 NA coding upstream 1112 23632541 ~ 23632612 (+)
trnaw-cca-28 NA coding upstream 2300 23631353 ~ 23631424 (+)
trnaw-cca-27 NA coding upstream 3463 23630190 ~ 23630261 (+)
trnaw-cca-26 NA coding upstream 4653 23629000 ~ 23629071 (+)
trnaw-cca-25 NA coding upstream 5841 23627812 ~ 23627883 (+)
trnaw-cca-30 NA coding downstream 1117 23634912 ~ 23634983 (+)
trnar-ccu-50 NA coding downstream 2304 23636099 ~ 23636170 (+)
trnar-ccu-51 NA coding downstream 3492 23637287 ~ 23637358 (+)
trnaw-cca-31 NA coding downstream 4681 23638476 ~ 23638547 (+)
trnaw-cca-32 NA coding downstream 5872 23639667 ~ 23639738 (+)
G1354199 NA non-coding upstream 12822 23597617 ~ 23620902 (+)
G1354136 NA non-coding upstream 126908 23505186 ~ 23506816 (+)
G1354115 NA non-coding upstream 173207 23454181 ~ 23460517 (+)
G1354114 NA non-coding upstream 174352 23453127 ~ 23459372 (+)
G1354084 LOC106579160 non-coding upstream 238692 23390762 ~ 23395032 (+)
G1354215 NA non-coding downstream 70104 23703899 ~ 23712056 (+)
G1354168 NA non-coding downstream 148654 23782449 ~ 23784110 (+)
G1354281 NA non-coding downstream 194107 23827902 ~ 23916365 (+)
G1354286 NA non-coding downstream 201064 23834859 ~ 23859610 (+)
G1354172 NA non-coding downstream 217528 23851323 ~ 23856448 (+)
LOC110491671 LOC106579157 other upstream 145112 23430867 ~ 23488782 (+)
G1353660 NA other upstream 334971 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 507413 23123859 ~ 23134383 (+)
G1353519 NA other upstream 587840 23045269 ~ 23045884 (+)
G1353021 NA other upstream 1001419 22631879 ~ 22632305 (+)
G1354668 NA other downstream 359823 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 451913 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 1036644 24670341 ~ 24681115 (+)
G1355273 NA other downstream 1047619 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 1130844 24764607 ~ 24783513 (+)

Expression


Co-expression Network