trnaw-cca-40


Basic Information

Item Value
gene id trnaw-cca-40
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23654866 ~ 23654937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-40
gacctcgtggcgcaaaggtagcgcgtctgactccagatcagaaggttgtgtgttcaaatcgcgtcgtggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-40 True 72 mRNA 0.56 1 23654866 23654937

Neighbor

gene id symbol gene type direction distance location
trnaw-cca-39 NA coding upstream 779 23654016 ~ 23654087 (+)
trnaw-cca-38 NA coding upstream 2422 23652373 ~ 23652444 (+)
trnaw-cca-37 NA coding upstream 3272 23651523 ~ 23651594 (+)
trnaw-cca-36 NA coding upstream 4911 23649884 ~ 23649955 (+)
trnaw-cca-35 NA coding upstream 6373 23648422 ~ 23648493 (+)
trnaw-cca-41 NA coding downstream 1572 23656509 ~ 23656580 (+)
trnaw-cca-42 NA coding downstream 2422 23657359 ~ 23657430 (+)
trnaw-cca-43 NA coding downstream 4065 23659002 ~ 23659073 (+)
trnaw-cca-44 NA coding downstream 8418 23663355 ~ 23663426 (+)
trnaw-cca-45 NA coding downstream 9983 23664920 ~ 23664991 (+)
G1354199 NA non-coding upstream 33964 23597617 ~ 23620902 (+)
G1354136 NA non-coding upstream 148050 23505186 ~ 23506816 (+)
G1354115 NA non-coding upstream 194349 23454181 ~ 23460517 (+)
G1354114 NA non-coding upstream 195494 23453127 ~ 23459372 (+)
G1354084 LOC106579160 non-coding upstream 259834 23390762 ~ 23395032 (+)
G1354215 NA non-coding downstream 48962 23703899 ~ 23712056 (+)
G1354168 NA non-coding downstream 127512 23782449 ~ 23784110 (+)
G1354281 NA non-coding downstream 172965 23827902 ~ 23916365 (+)
G1354286 NA non-coding downstream 179922 23834859 ~ 23859610 (+)
G1354172 NA non-coding downstream 196386 23851323 ~ 23856448 (+)
LOC110491671 LOC106579157 other upstream 166254 23430867 ~ 23488782 (+)
G1353660 NA other upstream 356113 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 528555 23123859 ~ 23134383 (+)
G1353519 NA other upstream 608982 23045269 ~ 23045884 (+)
G1353021 NA other upstream 1022561 22631879 ~ 22632305 (+)
G1354668 NA other downstream 338681 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 430771 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 1015502 24670341 ~ 24681115 (+)
G1355273 NA other downstream 1026477 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 1109702 24764607 ~ 24783513 (+)

Expression


Co-expression Network