trnaw-cca-45


Basic Information

Item Value
gene id trnaw-cca-45
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23664920 ~ 23664991 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-45
gacctcgtggcgcaaaggtagtgcgtctgactccagatcagaaggttgcgtgttcaaatcgcgtcgtggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-45 True 72 mRNA 0.56 1 23664920 23664991

Neighbor

gene id symbol gene type direction distance location
trnaw-cca-44 NA coding upstream 1494 23663355 ~ 23663426 (+)
trnaw-cca-43 NA coding upstream 5847 23659002 ~ 23659073 (+)
trnaw-cca-42 NA coding upstream 7490 23657359 ~ 23657430 (+)
trnaw-cca-41 NA coding upstream 8340 23656509 ~ 23656580 (+)
trnaw-cca-40 NA coding upstream 9983 23654866 ~ 23654937 (+)
trnaw-cca-46 NA coding downstream 2690 23667681 ~ 23667752 (+)
trnaw-cca-47 NA coding downstream 3763 23668754 ~ 23668825 (+)
trnaw-cca-48 NA coding downstream 6534 23671525 ~ 23671596 (+)
trnaw-cca-49 NA coding downstream 9705 23674696 ~ 23674767 (+)
trnaw-cca-50 NA coding downstream 11348 23676339 ~ 23676410 (+)
G1354199 NA non-coding upstream 44018 23597617 ~ 23620902 (+)
G1354136 NA non-coding upstream 158104 23505186 ~ 23506816 (+)
G1354115 NA non-coding upstream 204403 23454181 ~ 23460517 (+)
G1354114 NA non-coding upstream 205548 23453127 ~ 23459372 (+)
G1354084 LOC106579160 non-coding upstream 269888 23390762 ~ 23395032 (+)
G1354215 NA non-coding downstream 38908 23703899 ~ 23712056 (+)
G1354168 NA non-coding downstream 117458 23782449 ~ 23784110 (+)
G1354281 NA non-coding downstream 162911 23827902 ~ 23916365 (+)
G1354286 NA non-coding downstream 169868 23834859 ~ 23859610 (+)
G1354172 NA non-coding downstream 186332 23851323 ~ 23856448 (+)
LOC110491671 LOC106579157 other upstream 176308 23430867 ~ 23488782 (+)
G1353660 NA other upstream 366167 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 538609 23123859 ~ 23134383 (+)
G1353519 NA other upstream 619036 23045269 ~ 23045884 (+)
G1353021 NA other upstream 1032615 22631879 ~ 22632305 (+)
G1354668 NA other downstream 328627 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 420717 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 1005448 24670341 ~ 24681115 (+)
G1355273 NA other downstream 1016423 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 1099648 24764607 ~ 24783513 (+)

Expression


Co-expression Network