trnaw-cca-49


Basic Information

Item Value
gene id trnaw-cca-49
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 23674696 ~ 23674767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaw-cca-49
GACCTCGTGGCGCAaaggtagcgcgtctgactccagatcagaaggttgcgtgttcaaatcgcgtcgtggtca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaw-cca-49 True 72 mRNA 0.57 1 23674696 23674767

Neighbor

gene id symbol gene type direction distance location
trnaw-cca-48 NA coding upstream 3100 23671525 ~ 23671596 (+)
trnaw-cca-47 NA coding upstream 5871 23668754 ~ 23668825 (+)
trnaw-cca-46 NA coding upstream 6944 23667681 ~ 23667752 (+)
trnaw-cca-45 NA coding upstream 9705 23664920 ~ 23664991 (+)
trnaw-cca-44 NA coding upstream 11270 23663355 ~ 23663426 (+)
trnaw-cca-50 NA coding downstream 1572 23676339 ~ 23676410 (+)
trnaw-cca-51 NA coding downstream 3670 23678437 ~ 23678508 (+)
trnaw-cca-52 NA coding downstream 5462 23680229 ~ 23680300 (+)
trnaw-cca-53 NA coding downstream 6539 23681306 ~ 23681377 (+)
trnaw-cca-54 NA coding downstream 9679 23684446 ~ 23684517 (+)
G1354199 NA non-coding upstream 53794 23597617 ~ 23620902 (+)
G1354136 NA non-coding upstream 167880 23505186 ~ 23506816 (+)
G1354115 NA non-coding upstream 214179 23454181 ~ 23460517 (+)
G1354114 NA non-coding upstream 215324 23453127 ~ 23459372 (+)
G1354084 LOC106579160 non-coding upstream 279664 23390762 ~ 23395032 (+)
G1354215 NA non-coding downstream 29132 23703899 ~ 23712056 (+)
G1354168 NA non-coding downstream 107682 23782449 ~ 23784110 (+)
G1354281 NA non-coding downstream 153135 23827902 ~ 23916365 (+)
G1354286 NA non-coding downstream 160092 23834859 ~ 23859610 (+)
G1354172 NA non-coding downstream 176556 23851323 ~ 23856448 (+)
LOC110491671 LOC106579157 other upstream 186084 23430867 ~ 23488782 (+)
G1353660 NA other upstream 375943 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 548385 23123859 ~ 23134383 (+)
G1353519 NA other upstream 628812 23045269 ~ 23045884 (+)
G1353021 NA other upstream 1042391 22631879 ~ 22632305 (+)
G1354668 NA other downstream 318851 23993618 ~ 23995021 (+)
G1354681 rpl19 other downstream 410941 24085708 ~ 24090034 (+)
LOC110491698 LOC106579132 other downstream 995672 24670341 ~ 24681115 (+)
G1355273 NA other downstream 1006647 24681414 ~ 24684055 (+)
dcakd dcakd other downstream 1089872 24764607 ~ 24783513 (+)

Expression


Co-expression Network