LOC110491695


Basic Information

Item Value
gene id LOC110491695
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 24606064 ~ 24607211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110491695
gctgtaatcgctgccaaaggtgcttcaaccaaatactgagtaaagggtctgaatacttatgtaaatgtgatatttcagctttttatttttaatgactTTGCTAACACTTCTTAAAtcctgtttttggtttgtcattatgaggtattgtgtgtagattgatgagggggggataaaacatttgaatccattttagaataaagctgtaacataacaaaatgtggaaaaagtcaaggagtctgaatactttccaaatgcactgtatgtttgggCTTcctgcggtcaatttgcagtctacaaatggtTTGTAATTAAGTTTCGGCTCCCTGACAATACACTCAACAGAAAATCGTCCcaaggctgaatctagttgatgatctctaaTTCAGGCTATGTTTGACACATGATATCATGTTGTAATCAATTCCACACCCTTTCCAATTTCTCAGGGACAGTGTTCTCGTTCCTGTTGGAGAGCGACACTTTCCATGTGAAACTCTCTGCTAAAATCCAGACGCCCATTTCCGCTATGACCGTGTGCTTGCGGTTCTTCTCTGAGGTTGGCAGAGGCCAGTCCATTGTCTCACTGGCAGGCCCGTCATGATAAGGATTTGCTGTTGTTCAAACCATATGTGAGGGGAGCATACTGAGTGCACATCAAAGAAGCTGGACTGGATTTCTTGAGGTTGCCAGATAATAAGAATGAATGGAACTCCATCTGCTGGACCTGGGACTCTTACACTGGTCTGACCCAACTCTGGATAAATGGGAAGTGAAGTACATGGAAGTTTGTTACTTCGGACATTTCTATAACTGGAAAGCCAAGTATTATTTTAGGTTAAGAGCAATACACATATGGGGTGGGGCTTTCATAGATTACAGTCCTTTGTGGGGGACCTGGCCAATGTCCACTTATGGGATAGTGTCCTCCCTCCTTGACAAATTCGATTTTTATGTTAAGGGAAATTCCTTCACTCCTGGAAATATTCTAAACTGGAAAGCATTAGAGTACATAACTGAGGGGAACATGTTCAAGGAGAAGAGTGACTTTGATAATGTTGCCTGAACACTAGCATGATTTTTTTATCTGTCTTTCAATGTGTGTGATAACTGTTTCAGCTGTTTCAACATTATTATATGCTATAATACGA

Function

NR:

description
pentraxin precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110491695 True 1148 mRNA 0.40 1 24606064 24607211

Neighbor

gene id symbol gene type direction distance location
LOC110491694 atp6v0a1 coding upstream 3386 24562785 ~ 24602678 (+)
LOC110491693 LOC106579137 coding upstream 45279 24521646 ~ 24560785 (+)
LOC110491690 znf385c coding upstream 85131 24382241 ~ 24520933 (+)
LOC110491689 rab5c coding upstream 242673 24350009 ~ 24363391 (+)
kcnh4b kcnh4 coding upstream 294068 24242540 ~ 24311996 (+)
naglu naglu coding downstream 19471 24626682 ~ 24645022 (+)
LOC110491698 LOC106579132 coding downstream 63130 24670341 ~ 24681115 (+)
coasy coasy coding downstream 77719 24684930 ~ 24700595 (+)
pus3 pus3 coding downstream 142897 24750108 ~ 24759143 (+)
dcakd dcakd coding downstream 157396 24764607 ~ 24783513 (+)
G1355148 NA non-coding upstream 161313 24444301 ~ 24444751 (+)
G1355110 NA non-coding upstream 211032 24394659 ~ 24395032 (+)
G1355107 NA non-coding upstream 216081 24389763 ~ 24389983 (+)
G1355072 NA non-coding upstream 235343 24370423 ~ 24370721 (+)
G1355239 NA non-coding downstream 14484 24621695 ~ 24636240 (+)
G1355100 NA non-coding downstream 50306 24657517 ~ 24657836 (+)
G1355269 NA non-coding downstream 60382 24667593 ~ 24667950 (+)
G1355273 NA non-coding downstream 74705 24681414 ~ 24684055 (+)
G1354681 rpl19 other upstream 516030 24085708 ~ 24090034 (+)
G1354668 NA other upstream 611043 23993618 ~ 23995021 (+)
LOC110491671 LOC106579157 other upstream 1117452 23430867 ~ 23488782 (+)
G1353660 NA other upstream 1307311 23298457 ~ 23298753 (+)
LOC110491658 LOC106579351 other upstream 1479753 23123859 ~ 23134383 (+)
znf281b LOC106578343 other downstream 1469330 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1697740 26283071 ~ 26314809 (+)

Expression


Co-expression Network