zdhhc6 (zdhhc6)


Basic Information

Item Value
gene id zdhhc6
gene name zdhhc6
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 25202421 ~ 25213711 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565390.2
TCAAAAAGTAAGTGCTTCTGTTCAAAAAGTAAGTGCTTCCGAAAATACGTTTATTTTGAAATGCATGGAAAAAAACGTTGACGCCAGGTCCCACGGTAATCTCGCGATAGACTGGAACACGGCTTAAATCAAGGAAGTCGCAAGATGGAGAACTTGCATCTCTCACAGGGATAGTGCAGTCTCCCGTGCTGTCAAAGGATGCCGCTCATCGCCAGGAACACAAAGAACTCTGGGACACGGACTGCCTCTGTAACTTGCAACCCAGCCGGTTGCTGGGTGTTCAGAAGACGAGAGAAAAGATGCCCGTTGTCTTCATTGTCTGTGCCAGATAGTAGAGAGAAGCAGTGCGTCTAACCTCTGTGTTCGACAAACTCCCCAACCACAACGCCTTTAAAAccttaacacaacacacacaaaaacaaccaAAAAAAACTATGAACTTTCTTACAGCCCTCGTGACGTTTGAGAACATCCATGAGGTCCGGAGGTTGTGTCACTGGGGCCCAGTGATAGCCCTGACAGTCATCGCCGTGTGCTCCTCCATGGCCATATTAGACTCCATTATCTGGTACTGGCCATTGGACACCACAGGAGGGAGCTTCAACTTCATCATGCTCATCAACTGGTCCGTGCTCATTCTCTACAACTACTTCAACGCCATGTTCGTGGGCCCTGGTTACATCCCCCTTGGCTGGAAACCAGAGAAGGAAGAAGACACCAAGTACCTTCAGTTCTGCAGAATGTGCCAAGGCTACAAGGCCCCGAGATCCCACCATTGCCGCAAGTGCAACAGGTGTGTGATGAAGATGGATCACCACTGCCCGTGGATCAACAACTGCTGCGGCCACCAGAACCACGCCTACTTCACCAGTTTCCTGCTGTTGGCGCCTCTCGGCTGCTCGCACGCCGCTTTCATCTTCATCATGACCATGTACACACAGCTCTACGAGAGGATATCCTTTGGCTGGAGTACCGTGAAGATCGACATGAGCGCCGTCAGACGGTTTCAACCCATCATGCCGTTCAGCGTACCCGCCTTCGCTGCCACTCTCTTTGCCTTAGGGCTGGCACTGGGCACCACCATAGCCGTTGGCATGTTGTTCTTCATACAGATGAAAGTCATCCTTCGAAACAAGACCTCCGTTGAGGCCTGGATCGAGGAAAAGGCCAAAGACAGAATTCAGTACTACCAAACGGGGGAAGAGTTTATCTTCCCCTACGACCTGGGCCGGCGCTGGGAGAACTTCAAACAGGTGTTCACCTGGTCAGGGAGCCCAGAGGGCGACGGCATTCAATGGCCCATCCACGCCAAGTGTCACCAGCACACCTTAACCATTGAGCAACTGAAACAAAAAGCTGACAAGCGGGTGAGAAGTCAGATTCAGTATCGGGTAGTGGAGGACTACAACGGAGCCTGCTGCCCACTGAGCAAGGGCTTCAACACCTTCTTCAGGACTCCCTGCACCGAGGAGCCCCGCATCGGCCTCCACAAGGGGGAGACCATCCTTGCCACCCGGGGGACCAAATGGTGGATGTATGGGGACAAAGTGCTGGATGACGAGCAGACTAAAGCTGGAGCTCGCCTGCGGGGTTGGTTTCCCCGCCGGTGCGTAGAGAAGTGCCATTACGACACAGCAGTGACTAGTGCAATGACCAGTGAGACCAGCAGTGAGGAGAAGAAAGTGAAATAAGTTTATGACATTCAGATTTGCCACAAGGCAGGGAGTGGTATGACGCCCAATTCCTGGAGGTCTGCATTGTCTCTTGTCTTTCTCCTTGGTAATATGTAATACTATATGCCACTGAACAGATGATTTTTTAATTCAAGCGAAGTACAGTGAGTGATGTGTATGTGTTCCCTGTGGAAAATGAACCCGCTACCTCGGTGCCACCAGCGCCATGcccttaccaactgagccaccgAGGTCTTTGTGTGTCTTTCAATGGGTGAATCGTAATTGTATTTTTGCGCTCTGGGCTTTGAATACTGTTGAGACTCGCCCCCAGTCGCTCACCAACTAAGGAGTTCACAATCCCGGGATGTGTTTTGATAGTCAATTACTTGGCAAAGTGACTTTCACCCTTCGTCTGTACTGATCTGGAAACGTAGGCTCAATGAGAGCAATATGGTGAATGCTTACAGACTTTTTTTCATTCACCTGTCAAAATCACATCAGTGCAGAtaaggagaggaagccactttagCCTATTGAAATACATCCCTGCTTTCCCAGGTCAAAATCGGATACTAGTTACAAGGAAACATTTTCATTTTAGCAGACACTATAAttcagagcgatttacaggagcagTTAGGGTCaagtgcattgctcaagggcactgacagttttcacctagtcagctcggcgattcaaaccagcgacctttgggtgactggcccaatgctctgaaccgccaggctacctgcatACGCCCCTGGCCTCCAGGAGTTTAGTTTGATACCGCTGCCATAGAAAGAGACAACTATAGTCTTAAACAATAGGGATTTCATTTGTTTAGGAGTTGGGCCTTTTACTTGAATCCGCTGTTTTATAATTTTTCCTGATGTCCTTTGCCGATTATACAATTATGCAAATTCCTCTGCCCAGCTTTAACCCAGGGCTTCGTCATGCAATTTCTTCTCTGTATTCTTTGTACAGCCAAAAGAAAATGCTAActtttgttttaatttttttaattgttCTTATTATTTTTGTAAAACACTGTCACCCTCAAAGTgaataaaaaaatgaaacatgTCCTTCCCTATAA
>XM_021565392.2
TCAAAAAGTAAGTGCTTCTGTTCAAAAAGTAAGTGCTTCCGAAAATACGTTTATTTTGAAATGCATGGAAAAAAACGTTGACGCCAGGTCCCACGGTAATCTCGCGATAGACTGGAACACGGCTTAAATCAAGGAAGTCGCAAGATGGAGAACTTGCATCTCTCACAGGGATAGTGCAGTCTCCCGTGCTGTCAAAGGATGCCGCTCATCGCCAGGAACACAAAGAACTCTGGGACACGGACTGCCTCTGTAACTTGCAACCCAGCCGGTTGCTGGGTGTTCAGAAGACGAGAGAAAAGATGCCCGTTGTCTTCATTGTCTGTGCCAGATAGTAGAGAGAAGCAGTGCGTCTAACCTCTGTGTTCGACAAACTCCCCAACCACAACGCCTTTAAAAccttaacacaacacacacaaaaacaaccaAAAAAAACTATGAACTTTCTTACAGCCCTCGTGACGTTTGAGAACATCCATGAGGTCCGGAGGTTGTGTCACTGGGGCCCAGTGATAGCCCTGACAGTCATCGCCGTGTGCTCCTCCATGGCCATATTAGACTCCATTATCTGGTACTGGCCATTGGACACCACAGGAGGGAGCTTCAACTTCATCATGCTCATCAACTGGTCCGTGCTCATTCTCTACAACTACTTCAACGCCATGTTCGTGGGCCCTGGTTACATCCCCCTTGGCTGGAAACCAGAGAAGGAAGAAGACACCAAGTACCTTCAGTTCTGCAGAATGTGCCAAGGCTACAAGGCCCCGAGATCCCACCATTGCCGCAAGTGCAACAGGTGTGTGATGAAGATGGATCACCACTGCCCGTGGATCAACAACTGCTGCGGCCACCAGAACCACGCCTACTTCACCAGTTTCCTGCTGTTGGCGCCTCTCGGCTGCTCGCACGCCGCTTTCATCTTCATCATGACCATGTACACACAGCTCTACGAGAGGATATCCTTTGGCTGGAGTACCGTGAAGATCGACATGAGCGCCGTCAGACGGTTTCAACCCATCATGCCGTTCAGCGTACCCGCCTTCGCTGCCACTCTCTTTGCCTTAGGGCTGGCACTGGGCACCACCATAGCCGTTGGCATGTTGTTCTTCATACAGATGAAAGTCATCCTTCGAAACAAGACCTCCGTTGAGGCCTGGATCGAGGAAAAGGCCAAAGACAGAATTCAGTACTACCAAACGGGGGAAGAGTTTATCTTCCCCTACGACCTGGGCCGGCGCTGGGAGAACTTCAAACAGGTGTTCACCTGGTCAGGGAGCCCAGAGGGCGACGGCATTCAATGGCCCATCCACGCCAAGTGTCACCAGCACACCTTAACCATTGAGCAACTGAAACAAAAAGCTGACAAGCGGGTGAGAAGTATTCAGTATCGGGTAGTGGAGGACTACAACGGAGCCTGCTGCCCACTGAGCAAGGGCTTCAACACCTTCTTCAGGACTCCCTGCACCGAGGAGCCCCGCATCGGCCTCCACAAGGGGGAGACCATCCTTGCCACCCGGGGGACCAAATGGTGGATGTATGGGGACAAAGTGCTGGATGACGAGCAGACTAAAGCTGGAGCTCGCCTGCGGGGTTGGTTTCCCCGCCGGTGCGTAGAGAAGTGCCATTACGACACAGCAGTGACTAGTGCAATGACCAGTGAGACCAGCAGTGAGGAGAAGAAAGTGAAATAAGTTTATGACATTCAGATTTGCCACAAGGCAGGGAGTGGTATGACGCCCAATTCCTGGAGGTCTGCATTGTCTCTTGTCTTTCTCCTTGGTAATATGTAATACTATATGCCACTGAACAGATGATTTTTTAATTCAAGCGAAGTACAGTGAGTGATGTGTATGTGTTCCCTGTGGAAAATGAACCCGCTACCTCGGTGCCACCAGCGCCATGcccttaccaactgagccaccgAGGTCTTTGTGTGTCTTTCAATGGGTGAATCGTAATTGTATTTTTGCGCTCTGGGCTTTGAATACTGTTGAGACTCGCCCCCAGTCGCTCACCAACTAAGGAGTTCACAATCCCGGGATGTGTTTTGATAGTCAATTACTTGGCAAAGTGACTTTCACCCTTCGTCTGTACTGATCTGGAAACGTAGGCTCAATGAGAGCAATATGGTGAATGCTTACAGACTTTTTTTCATTCACCTGTCAAAATCACATCAGTGCAGAtaaggagaggaagccactttagCCTATTGAAATACATCCCTGCTTTCCCAGGTCAAAATCGGATACTAGTTACAAGGAAACATTTTCATTTTAGCAGACACTATAAttcagagcgatttacaggagcagTTAGGGTCaagtgcattgctcaagggcactgacagttttcacctagtcagctcggcgattcaaaccagcgacctttgggtgactggcccaatgctctgaaccgccaggctacctgcatACGCCCCTGGCCTCCAGGAGTTTAGTTTGATACCGCTGCCATAGAAAGAGACAACTATAGTCTTAAACAATAGGGATTTCATTTGTTTAGGAGTTGGGCCTTTTACTTGAATCCGCTGTTTTATAATTTTTCCTGATGTCCTTTGCCGATTATACAATTATGCAAATTCCTCTGCCCAGCTTTAACCCAGGGCTTCGTCATGCAATTTCTTCTCTGTATTCTTTGTACAGCCAAAAGAAAATGCTAActtttgttttaatttttttaattgttCTTATTATTTTTGTAAAACACTGTCACCCTCAAAGTgaataaaaaaatgaaacatgTCCTTCCCTATAA
>XM_021565391.2
ATTCATGAACATTGACATGTTGTCGATGGAGAACTTGCATCTCTCACAGGGATAGTGCAGTCTCCCGTGCTGTCAAAGGATGCCGCTCATCGCCAGGAACACAAAGAACTCTGGGACACGGACTGCCTCTGTAACTTGCAACCCAGCCGGTTGCTGGGTGTTCAGAAGACGAGAGAAAAGATGCCCGTTGTCTTCATTGTCTGTGCCAGATAGTAGAGAGAAGCAGTGCGTCTAACCTCTGTGTTCGACAAACTCCCCAACCACAACGCCTTTAAAAccttaacacaacacacacaaaaacaaccaAAAAAAACTATGAACTTTCTTACAGCCCTCGTGACGTTTGAGAACATCCATGAGGTCCGGAGGTTGTGTCACTGGGGCCCAGTGATAGCCCTGACAGTCATCGCCGTGTGCTCCTCCATGGCCATATTAGACTCCATTATCTGGTACTGGCCATTGGACACCACAGGAGGGAGCTTCAACTTCATCATGCTCATCAACTGGTCCGTGCTCATTCTCTACAACTACTTCAACGCCATGTTCGTGGGCCCTGGTTACATCCCCCTTGGCTGGAAACCAGAGAAGGAAGAAGACACCAAGTACCTTCAGTTCTGCAGAATGTGCCAAGGCTACAAGGCCCCGAGATCCCACCATTGCCGCAAGTGCAACAGGTGTGTGATGAAGATGGATCACCACTGCCCGTGGATCAACAACTGCTGCGGCCACCAGAACCACGCCTACTTCACCAGTTTCCTGCTGTTGGCGCCTCTCGGCTGCTCGCACGCCGCTTTCATCTTCATCATGACCATGTACACACAGCTCTACGAGAGGATATCCTTTGGCTGGAGTACCGTGAAGATCGACATGAGCGCCGTCAGACGGTTTCAACCCATCATGCCGTTCAGCGTACCCGCCTTCGCTGCCACTCTCTTTGCCTTAGGGCTGGCACTGGGCACCACCATAGCCGTTGGCATGTTGTTCTTCATACAGATGAAAGTCATCCTTCGAAACAAGACCTCCGTTGAGGCCTGGATCGAGGAAAAGGCCAAAGACAGAATTCAGTACTACCAAACGGGGGAAGAGTTTATCTTCCCCTACGACCTGGGCCGGCGCTGGGAGAACTTCAAACAGGTGTTCACCTGGTCAGGGAGCCCAGAGGGCGACGGCATTCAATGGCCCATCCACGCCAAGTGTCACCAGCACACCTTAACCATTGAGCAACTGAAACAAAAAGCTGACAAGCGGGTGAGAAGTCAGATTCAGTATCGGGTAGTGGAGGACTACAACGGAGCCTGCTGCCCACTGAGCAAGGGCTTCAACACCTTCTTCAGGACTCCCTGCACCGAGGAGCCCCGCATCGGCCTCCACAAGGGGGAGACCATCCTTGCCACCCGGGGGACCAAATGGTGGATGTATGGGGACAAAGTGCTGGATGACGAGCAGACTAAAGCTGGAGCTCGCCTGCGGGGTTGGTTTCCCCGCCGGTGCGTAGAGAAGTGCCATTACGACACAGCAGTGACTAGTGCAATGACCAGTGAGACCAGCAGTGAGGAGAAGAAAGTGAAATAAGTTTATGACATTCAGATTTGCCACAAGGCAGGGAGTGGTATGACGCCCAATTCCTGGAGGTCTGCATTGTCTCTTGTCTTTCTCCTTGGTAATATGTAATACTATATGCCACTGAACAGATGATTTTTTAATTCAAGCGAAGTACAGTGAGTGATGTGTATGTGTTCCCTGTGGAAAATGAACCCGCTACCTCGGTGCCACCAGCGCCATGcccttaccaactgagccaccgAGGTCTTTGTGTGTCTTTCAATGGGTGAATCGTAATTGTATTTTTGCGCTCTGGGCTTTGAATACTGTTGAGACTCGCCCCCAGTCGCTCACCAACTAAGGAGTTCACAATCCCGGGATGTGTTTTGATAGTCAATTACTTGGCAAAGTGACTTTCACCCTTCGTCTGTACTGATCTGGAAACGTAGGCTCAATGAGAGCAATATGGTGAATGCTTACAGACTTTTTTTCATTCACCTGTCAAAATCACATCAGTGCAGAtaaggagaggaagccactttagCCTATTGAAATACATCCCTGCTTTCCCAGGTCAAAATCGGATACTAGTTACAAGGAAACATTTTCATTTTAGCAGACACTATAAttcagagcgatttacaggagcagTTAGGGTCaagtgcattgctcaagggcactgacagttttcacctagtcagctcggcgattcaaaccagcgacctttgggtgactggcccaatgctctgaaccgccaggctacctgcatACGCCCCTGGCCTCCAGGAGTTTAGTTTGATACCGCTGCCATAGAAAGAGACAACTATAGTCTTAAACAATAGGGATTTCATTTGTTTAGGAGTTGGGCCTTTTACTTGAATCCGCTGTTTTATAATTTTTCCTGATGTCCTTTGCCGATTATACAATTATGCAAATTCCTCTGCCCAGCTTTAACCCAGGGCTTCGTCATGCAATTTCTTCTCTGTATTCTTTGTACAGCCAAAAGAAAATGCTAActtttgttttaatttttttaattgttCTTATTATTTTTGTAAAACACTGTCACCCTCAAAGTgaataaaaaaatgaaacatgTCCTTCCCTATAA

Function

symbol description
zdhhc6 Predicted to enable protein-cysteine S-palmitoyltransferase activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation and protein targeting to membrane. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Orthologous to human ZDHHC6 (zinc finger DHHC-type palmitoyltransferase 6).

NR:

description
palmitoyltransferase ZDHHC6 isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K20031 ZDHHC6; palmitoyltransferase ZDHHC6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565390.2 False 2772 mRNA 0.48 11 25202421 25213711
XM_021565392.2 False 2769 mRNA 0.48 11 25202421 25213711
XM_021565391.2 True 2653 mRNA 0.49 11 25202581 25213711

Neighbor

gene id symbol gene type direction distance location
LOC110491714 LOC106579122 coding upstream 10888 25165386 ~ 25191533 (+)
mapta NA coding upstream 109436 25045692 ~ 25092985 (+)
trnaa-ugc-127 NA coding upstream 171022 25031329 ~ 25031399 (+)
ifn5 cd79b coding upstream 309750 24889101 ~ 24897741 (+)
ccr10 LOC106579362 coding upstream 341291 24857512 ~ 24861130 (+)
gucy2g LOC106579347 coding downstream 116703 25330414 ~ 25367122 (+)
plxdc1 LOC106579118 coding downstream 220399 25434110 ~ 25527003 (+)
LOC110491720 lasp1 coding downstream 343556 25557267 ~ 25592916 (+)
arhgap23b LOC106579110 coding downstream 417500 25631211 ~ 25702729 (+)
plcd3b LOC106579107 coding downstream 504597 25718308 ~ 25765325 (+)
G1355527 NA non-coding upstream 44373 25157227 ~ 25158048 (+)
G1355526 NA non-coding upstream 45596 25156589 ~ 25156825 (+)
G1355503 NA non-coding upstream 82723 25119276 ~ 25119698 (+)
G1355500 NA non-coding upstream 85600 25116590 ~ 25116821 (+)
G1355498 NA non-coding upstream 87629 25114185 ~ 25114792 (+)
G1355552 acsl5 non-coding downstream 3079 25216790 ~ 25226546 (+)
G1355575 NA non-coding downstream 47522 25261233 ~ 25261451 (+)
G1356094 NA non-coding downstream 76994 25290705 ~ 25290936 (+)
G1356111 NA non-coding downstream 90557 25304268 ~ 25304525 (+)
G1356272 NA non-coding downstream 390534 25604245 ~ 25604577 (+)
dcakd dcakd other upstream 418909 24764607 ~ 24783513 (+)
G1355273 NA other upstream 518502 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 521306 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 1112387 24085708 ~ 24090034 (+)
G1354668 NA other upstream 1207400 23993618 ~ 23995021 (+)
znf281b LOC106578343 other downstream 862830 26076461 ~ 26107407 (+)
mpp3b LOC106579097 other downstream 1091240 26283071 ~ 26314809 (+)
G1358292 NA other downstream 2115600 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 2347436 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 2689339 27902972 ~ 27986259 (+)

Expression


Co-expression Network