nmt1b (LOC106579105)


Basic Information

Item Value
gene id nmt1b
gene name LOC106579105
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 25774670 ~ 25780246 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036946609.1
GGGGTGGGGGACTAAGGCGGTCACTGTCCTCCCCTAACTGTCTCTAAAGATAAGAGACAAAGTGCCACACATATTCAGtattgtggtctctctctccGCTCTACAATGACTGATTCAAACCTTCCtGACAAGAACCTGGGGGAAGAAAATAGTGGCGGTCTGAAAAAAAGGAATAAGCAGAAGAAGAGCAAGGAGGATGCCTGGAAACTTGATGGACCCAAAGACCCGTTTGCTatgCTGGATGCTCTCCCGGAGGAAAAGCAGCAGGAGATCCAGAGGGCCCTACACCTCTTCTCCCTGGGCAAGGGCCTCCCGAGGACCCTGGAGGAGGCCAGCAGACGCCCCTACCCCTTCTGGGACACCCAGCCTGTCCCCAAACTAGGTGACGACAATGCCACAACCCATGGTCCTATTGAGGTGGATAAGGTCAGTGTTCGTGAGGAGCCTTACAGTCTACCACAGGGGTTCAGCTGGGCCCCCCTGGATCTGGGGGACCCTGCTGTGCTGAGGGAGCTGTGTGCTCTGCTGAATGAGAACTATATGGAAGAGGATGACAACACCTCCAGGTTTGACTTCTCCCCTGAGTATCTGCTGTGggcCCTGTGCCCCCCAGGTTGGTTGCCCCAGTGGCATTGTGGGGTAAAGGTGAACGGCAATCAGAAACTAGTGGGCTTCATCGCTGCCGTGCCCACTAACATCCGCATATATGACACGGAGAAGAGGATGGCGCAGGTCCACTTCCTGTGCGTCCACAAGAAGCTGCGCTCCAAACGAATGACTCCGGTGCTCATCAGAGAGGTCACCAGACGGGTCAACATGCAGGGAGTCTACCAGGCCGTCTACACTGCCAGTGGGGTACTGCCCAAACCTGTAGCTACCTGCAGGTACTGGCACCGCTCTCTAAACCCACGCAAGCTGATCGAGGTGAATTTCCCCATCTCCAGCCTGAGGGGCAACATGACCATCCAACGAGCGCTCAAGCTCAACCGCCTGCTTGAAGCTCCCAAAACAGCAGGTTTGCGGCCCATGACAAGGGGTGATGTGAAAGGGGTACACATGCTCCTTCAGGGGTACCTCAAGAAGTACCACCTGGCCCCCGTCCTGTCTCAGGAGGAAGTGGAGCACTGGTTGTTACCACGGGAGAATGTGATTGACACCTACGTGGTGGAGAACTCTGCTGGTGTGCTGACAGACTTTGTGAGTTTCTACACCATGGTGTCCAGGGTGCTGAACCATCCGGTACACAAGGGGCTGAAGGCAGCCCATTCCCTCTActgtgtctcctcctccactccactgCCTGACCTCATGGAGGATACTCTGTTCCTGGCCaaatctAAAGGCTTTGACGTCTTCACTGTTCTGGACCTGATGGAGAACACTTCTTTCCTGGAGAAGCTCAAGTTTGGCATCGGGGACAAGAGCCTACACTACTACCTGTACAATTGGAGATGTCCCACTATAGGCCTGAAAATGGTTGGCTTGGTGGTGCTGTGATGTCCATGACCACTGATAGGTGAAGACGGTGGACCaatccagggtttcccaaactcggtcctggggccccccctgggtgcacatttagttttttCCCTAGccctacacagctgattaaaataatcaaaGGTTGTATGATGAGttagttatttgaatcagctgtgtagtgctgggggAAACACTGGACCAATCAACCAGCAAAAACATCTGAGCCGTCCATTTAAGTTTGAACTTTGACCTGCACTACTATTTGTTCTGAGGCCTAGCAGGCAATGACAAACACTGTTATCTTAAACACACAATAAACACAAATGATGGAAGTGACACAAAAATGAATAAAGTTTCCATGATTTAAATGTA
>XM_036946610.1
GGGGTGGGGGACTAAGGCGGTCACTGTCCTCCCCTAACTGTCTCTAAAGATAAGAGACAAAGTGCCACACATATTCAGtattgtggtctctctctccGCTCTACAATGACTGATTCAAACCTTCCtGACAAGAACCTGGGGGAAGAAAATAGTGGCGGTCTGAAAAAAAGGAATAAGCAGAAGAAGAGCAAGGAGGATGCCTGGAAACTTGATGGACCCAAAGACCCGTTTGCTatgCTGGATGCTCTCCCGGAGGAAAAGCAGCAGGAGATCCAGAGGGCCCTACACCTCTTCTCCCTGGGCAAGGGCCTCCCGAGGACCCTGGAGGAGGCCAGCAGACGCCCCTACCCCTTCTGGGACACCCAGCCTGTCCCCAAACTAGGTGACGACAATGCCACAACCCATGGTCCTATTGAGGTGGATAAGGTCAGTGTTCGTGAGGAGCCTTACAGTCTACCACAGGGGTTCAGCTGGGCCCCCCTGGATCTGGGGGACCCTGCTGTGCTGAGGGAGCTGTGTGCTCTGCTGAATGAGAACTATATGGAAGAGGATGACAACACCTCCAGGTTTGACTTCTCCCCTGAGTATCTGCTGTGggcCCTGTGCCCCCCAGGTTGGTTGCCCCAGTGGCATTGTGGGGTAAAGGTGAACGGCAATCAGAAACTAGTGGGCTTCATCGCTGCCGTGCCCACTAACATCCGCATATATGACACGGAGAAGAGGATGGCGCAGGTCCACTTCCTGTGCGTCCACAAGAAGCTGCGCTCCAAACGAATGACTCCGGTGCTCATCAGAGAGGTCACCAGACGGGTCAACATGCAGGGAGTCTACCAGGCCGTCTACACTGCCAGTGGGGTACTGCCCAAACCTGTAGCTACCTGCAGGTACTGGCACCGCTCTCTAAACCCACGCAAGCTGATCGAGGCTCCCAAAACAGCAGGTTTGCGGCCCATGACAAGGGGTGATGTGAAAGGGGTACACATGCTCCTTCAGGGGTACCTCAAGAAGTACCACCTGGCCCCCGTCCTGTCTCAGGAGGAAGTGGAGCACTGGTTGTTACCACGGGAGAATGTGATTGACACCTACGTGGTGGAGAACTCTGCTGGTGTGCTGACAGACTTTGTGAGTTTCTACACCATGGTGTCCAGGGTGCTGAACCATCCGGTACACAAGGGGCTGAAGGCAGCCCATTCCCTCTActgtgtctcctcctccactccactgCCTGACCTCATGGAGGATACTCTGTTCCTGGCCaaatctAAAGGCTTTGACGTCTTCACTGTTCTGGACCTGATGGAGAACACTTCTTTCCTGGAGAAGCTCAAGTTTGGCATCGGGGACAAGAGCCTACACTACTACCTGTACAATTGGAGATGTCCCACTATAGGCCTGAAAATGGTTGGCTTGGTGGTGCTGTGATGTCCATGACCACTGATAGGTGAAGACGGTGGACCaatccagggtttcccaaactcggtcctggggccccccctgggtgcacatttagttttttCCCTAGccctacacagctgattaaaataatcaaaGGTTGTATGATGAGttagttatttgaatcagctgtgtagtgctgggggAAACACTGGACCAATCAACCAGCAAAAACATCTGAGCCGTCCATTTAAGTTTGAACTTTGACCTGCACTACTATTTGTTCTGAGGCCTAGCAGGCAATGACAAACACTGTTATCTTAAACACACAATAAACACAAATGATGGAAGTGACACAAAAATGAATAAAGTTTCCATGATTTAAATGTA

Function

NR:

description
glycylpeptide N-tetradecanoyltransferase 1-like

GO:

id name namespace
GO:0006499 N-terminal protein myristoylation biological_process
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036946609.1 False 1857 mRNA 0.52 12 25774670 25780246
XM_036946610.1 True 1782 mRNA 0.52 12 25774670 25780246
Loading

Neighbor

gene id symbol gene type direction distance location
plcd3b LOC106579107 coding upstream 9345 25718308 ~ 25765325 (+)
arhgap23b LOC106579110 coding upstream 71941 25631211 ~ 25702729 (+)
LOC110491720 lasp1 coding upstream 181754 25557267 ~ 25592916 (+)
plxdc1 LOC106579118 coding upstream 247667 25434110 ~ 25527003 (+)
gucy2g LOC106579347 coding upstream 407548 25330414 ~ 25367122 (+)
svild LOC106579103 coding downstream 15727 25795973 ~ 25907006 (+)
znf281b LOC106578343 coding downstream 296215 26076461 ~ 26107407 (+)
muc13b LOC106579100 coding downstream 352747 26132993 ~ 26166321 (+)
lrp2b LOC106579098 coding downstream 406569 26186815 ~ 26281363 (+)
mpp3b LOC106579097 coding downstream 502825 26283071 ~ 26314809 (+)
G1356272 NA non-coding upstream 170093 25604245 ~ 25604577 (+)
G1356111 NA non-coding upstream 470145 25304268 ~ 25304525 (+)
G1356094 NA non-coding upstream 483734 25290705 ~ 25290936 (+)
G1355575 NA non-coding upstream 513219 25261233 ~ 25261451 (+)
G1355552 acsl5 non-coding upstream 548124 25216790 ~ 25226546 (+)
G1356395 NA non-coding downstream 3600 25783846 ~ 25784196 (+)
G1356665 LOC106611498 non-coding downstream 7467 25787713 ~ 25787971 (+)
G1356754 NA non-coding downstream 173646 25953892 ~ 25954148 (+)
G1356755 NA non-coding downstream 174589 25954835 ~ 25955064 (+)
G1356780 NA non-coding downstream 224192 26004438 ~ 26069048 (+)
dcakd dcakd other upstream 991158 24764607 ~ 24783513 (+)
G1355273 NA other upstream 1090751 24681414 ~ 24684055 (+)
LOC110491698 LOC106579132 other upstream 1093555 24670341 ~ 24681115 (+)
G1354681 rpl19 other upstream 1684636 24085708 ~ 24090034 (+)
G1354668 NA other upstream 1779649 23993618 ~ 23995021 (+)
G1358292 NA other downstream 1549065 27329311 ~ 27332275 (+)
LOC110491768 LOC106579066 other downstream 1780901 27561141 ~ 27595350 (+)
LOC110491776 LOC106579398 other downstream 2122804 27902972 ~ 27986259 (+)

Expression

nmt1b(LOC106579105) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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nmt1b(LOC106579105) Expression in each Bioproject

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nmt1b(LOC106579105) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network