Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110491737 |
| gene name | LOC106579095 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 26370197 ~ 26381555 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ataxin-7-like protein 3 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021565426.2 | False | 1757 | mRNA | 0.44 | 8 | 26370197 | 26381396 |
| XM_021565425.2 | True | 1929 | mRNA | 0.43 | 8 | 26370197 | 26381555 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| smarcd2 | smarcd2 | coding | downstream | 698 | 26345698 ~ 26369499 (-) |
| LOC110491735 | LOC106579096 | coding | downstream | 27596 | 26319980 ~ 26342601 (-) |
| kcnj19b | LOC106579102 | coding | downstream | 332222 | 26006287 ~ 26037975 (-) |
| LOC110491727 | cssa19h17orf105 | coding | downstream | 585972 | 25780195 ~ 25784225 (-) |
| acbd4 | LOC106579108 | coding | downstream | 651911 | 25702829 ~ 25718286 (-) |
| LOC110491739 | LOC106579092 | coding | upstream | 7544 | 26389099 ~ 26405378 (-) |
| slc4a1b | LOC106579091 | coding | upstream | 25654 | 26407209 ~ 26449026 (-) |
| LOC118939473 | LOC106561172 | coding | upstream | 83058 | 26464613 ~ 26465753 (-) |
| LOC110491743 | LOC106579089 | coding | upstream | 287266 | 26668821 ~ 26714706 (-) |
| LOC110491745 | LOC106609103 | coding | upstream | 347836 | 26729304 ~ 26744821 (-) |
| G1357461 | NA | non-coding | downstream | 51158 | 26318173 ~ 26319039 (-) |
| G1357452 | NA | non-coding | downstream | 86128 | 26283053 ~ 26284069 (-) |
| G1357451 | NA | non-coding | downstream | 87456 | 26282441 ~ 26282741 (-) |
| G1357199 | NA | non-coding | downstream | 89014 | 26203836 ~ 26281183 (-) |
| G1357155 | LOC100194703 | non-coding | downstream | 206189 | 26144892 ~ 26164008 (-) |
| G1357596 | NA | non-coding | upstream | 178249 | 26559804 ~ 26565677 (-) |
| G1357617 | NA | non-coding | upstream | 219411 | 26600966 ~ 26601168 (-) |
| G1357631 | NA | non-coding | upstream | 237561 | 26619116 ~ 26619448 (-) |
| G1357632 | NA | non-coding | upstream | 238527 | 26620082 ~ 26620423 (-) |
| G1357635 | NA | non-coding | upstream | 242392 | 26623947 ~ 26624238 (-) |
| LOC110491708 | LOC106561205 | other | downstream | 1481553 | 24884866 ~ 24889077 (-) |
| LOC110492858 | LOC106579369 | other | downstream | 2335787 | 23995179 ~ 24034410 (-) |
| G1354433 | LOC106581475 | other | downstream | 2911650 | 23451825 ~ 23458547 (-) |
| G1354351 | NA | other | downstream | 3050805 | 23318569 ~ 23319392 (-) |
| G1353762 | NA | other | downstream | 3325436 | 23043249 ~ 23044761 (-) |
| G1357833 | NA | other | upstream | 345740 | 26727295 ~ 26727828 (-) |
| G1359119 | NA | other | upstream | 730228 | 27111783 ~ 27113401 (-) |
| G1359321 | NA | other | upstream | 975729 | 27357284 ~ 27359562 (-) |
| G1359412 | NA | other | upstream | 1145608 | 27527163 ~ 27528137 (-) |
