Item | Value |
---|---|
gene id | LOC110491745 |
gene name | LOC106609103 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048580.1 |
NCBI id | CM023234.2 |
chromosome length | 78541548 |
location | 26729304 ~ 26744821 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: uncharacterized protein LOC106609103 isoform X4 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XR_005036490.1 | False | 2382 | mRNA | 0.47 | 12 | 26729391 | 26743680 |
XR_002468880.2 | False | 2507 | mRNA | 0.47 | 13 | 26729391 | 26743689 |
XR_005036488.1 | False | 2493 | mRNA | 0.47 | 13 | 26729391 | 26743689 |
XR_005036489.1 | False | 2678 | mRNA | 0.46 | 14 | 26729391 | 26743807 |
XR_002468873.2 | False | 3126 | mRNA | 0.46 | 15 | 26729391 | 26743820 |
XR_002468876.2 | False | 3101 | mRNA | 0.46 | 13 | 26729391 | 26743822 |
XR_005036487.1 | False | 3028 | mRNA | 0.45 | 13 | 26729391 | 26743823 |
XR_002468872.2 | False | 3219 | mRNA | 0.46 | 14 | 26729391 | 26743824 |
XR_002468874.2 | False | 3216 | mRNA | 0.46 | 14 | 26729391 | 26743824 |
XR_002468877.2 | False | 3171 | mRNA | 0.46 | 14 | 26729391 | 26743825 |
XR_005036491.1 | False | 2686 | mRNA | 0.46 | 12 | 26730862 | 26743833 |
XM_036946625.1 | False | 2646 | mRNA | 0.41 | 8 | 26732461 | 26744821 |
TU1552016 | False | 2937 | TUCP | 0.46 | 14 | 26729304 | 26743455 |
TU1552018 | True | 3609 | lncRNA | 0.44 | 7 | 26729304 | 26734887 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110491743 | LOC106579089 | coding | downstream | 14685 | 26668821 ~ 26714706 (-) |
LOC118939473 | LOC106561172 | coding | downstream | 263638 | 26464613 ~ 26465753 (-) |
slc4a1b | LOC106579091 | coding | downstream | 280365 | 26407209 ~ 26449026 (-) |
LOC110491739 | LOC106579092 | coding | downstream | 324013 | 26389099 ~ 26405378 (-) |
LOC110491737 | LOC106579095 | coding | downstream | 347836 | 26370197 ~ 26381555 (-) |
LOC110491746 | LOC100710366 | coding | upstream | 23369 | 26768190 ~ 26799721 (-) |
LOC110491747 | LOC106579087 | coding | upstream | 81054 | 26825875 ~ 26855006 (-) |
rundc3ab | LOC106579086 | coding | upstream | 114055 | 26858876 ~ 26903949 (-) |
pth3r | LOC106579085 | coding | upstream | 191580 | 26936401 ~ 26994018 (-) |
LOC110491752 | LOC106579083 | coding | upstream | 253791 | 26998612 ~ 27002352 (-) |
G1357832 | NA | non-coding | downstream | 2329 | 26725993 ~ 26727062 (-) |
G1357853 | NA | non-coding | downstream | 4642 | 26724488 ~ 26724749 (-) |
G1357852 | NA | non-coding | downstream | 5037 | 26722702 ~ 26724354 (-) |
G1357681 | NA | non-coding | downstream | 68845 | 26654069 ~ 26660546 (-) |
G1357635 | NA | non-coding | downstream | 105153 | 26623947 ~ 26624238 (-) |
G1357860 | NA | non-coding | upstream | 8691 | 26753512 ~ 26753759 (-) |
G1357868 | NA | non-coding | upstream | 21206 | 26766027 ~ 26766247 (-) |
G1357878 | NA | non-coding | upstream | 46433 | 26791254 ~ 26794023 (-) |
G1358062 | NA | non-coding | upstream | 224356 | 26969177 ~ 26969378 (-) |
G1358066 | NA | non-coding | upstream | 230123 | 26974944 ~ 26975145 (-) |
G1357833 | NA | other | downstream | 1563 | 26727295 ~ 26727828 (-) |
LOC110491708 | LOC106561205 | other | downstream | 1840747 | 24884866 ~ 24889077 (-) |
LOC110492858 | LOC106579369 | other | downstream | 2694981 | 23995179 ~ 24034410 (-) |
G1354433 | LOC106581475 | other | downstream | 3270844 | 23451825 ~ 23458547 (-) |
G1354351 | NA | other | downstream | 3409999 | 23318569 ~ 23319392 (-) |
G1359119 | NA | other | upstream | 366962 | 27111783 ~ 27113401 (-) |
G1359321 | NA | other | upstream | 612463 | 27357284 ~ 27359562 (-) |
G1359412 | NA | other | upstream | 782342 | 27527163 ~ 27528137 (-) |
G1359763 | NA | other | upstream | 1418642 | 28163463 ~ 28164227 (-) |
taok2b | LOC106579406 | other | upstream | 1432894 | 28177715 ~ 28237354 (-) |
G1357834 | NA | non-coding | upstream | 1181 | 26736068 ~ 26750794 (-) |