LOC110492863 (paqr4)


Basic Information

Item Value
gene id LOC110492863
gene name paqr4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 27501331 ~ 27504634 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567338.2
CAGTGATTGCTGATTGGTCACACAGAAAGCATGCCACTCTGTGAGCTCAACAGGTCGCTTGCTAAGAACTTCAGTACCTGTTCCAAGGATGAGACTCGTGCCGACATTATCCTGCCAACTATCCTGCTTGACTTGACAATGTATGTGCCTAAAGTTCTTACTGGAGACTCTTTCAGGATATATGTATATTGCACGATCAACTAATGTCCTGTAAACTCAGGGGGACATTGGCTGGAGAAAGCCACCATGGCTTGCTTACATGGACCACGACTACTGAATTTGGAGAAAACCCCTCCTCATCTTCAGTTCAATGACTTGATCCTGACAGGCTACCGGCCAATTTCAACCTTTCAGGGGTGCATCAGAAGCTTGTTCTACTTGCACAATGAATTTGGTAACATTTATACCCATGgaATCCCATTCTTCTGTTTCCTTGTGCTGCTGCCACTTAACATCCCCTGGTCCGAGGTGGAGCAAACGTGGATGTGTGTGTTCCACTACCTTGCCTGCCTGTCCCCCACCGTGGGCTCAGTGCTTTACCACACCTTCATGAACCATGAGGGCGGGGAGCCCATCTACGACACACTCCTTTCCCTTGACATGGTCGGAGTCTGCCTGGTCAACACCTTGGGATGCCTGCCCATCATCTATATCACCCTGATGTGCTACCCTGGCACTTGCATCCTGGCCCTCCTGTCCTACAGCCTAATCTCAGCCTGGGGCATCCTCTGTGCCACCACAGCGCGTAGCAACTATGGGCGCCTTCGCGCTTTCATCTGGCAGGCCCTCTTCCGTgtgctcctcttcctgttccgtTGGCTGGGCGACGGTGTAGGCAGCCCAGCTTCGCTGCGCCTCTTCTTCACCATGGACATGCTGGCTATCATGGGTGGCCTGGTGAACCTTAGCCGGGTGCCCGAGCGTTTTAGCCCAGGCCTCTTCGACTACTGGTGCAACAGCCACCAGATAATGCATGTGCTGGTGATCTGCTCCATTATCTACATGCACTGGGGGATGCTGGAGGATTTAGCCTGGATTAAGACGTTCCAGTGTCCGGTGTTGGAGTGAGGGACAGAGA
>XM_036946675.1
CAGTGATTGCTGATTGGTCACACAGAAAGCATGCCACTCTGTGAGCTCAACAGGTCGCTTGCTAAGAACTTCAGTACCTGTTCCAAGGATGAGACTCGTGCCGACATTATCCTGCCAACTATCCTGCTTGACTTGACAATGTATGTGCCTAAAGTTCTTACTGGAGACTCTTTCAGGATATATGTATATTGCACGATCAACTAATGTCCTGTAAACTCAGGGGGACATTGGCTGGAGAAAGCCACCATGGCTTGCTTACATGGACCACGACTACTGAATTTGGAGAAAACCCCTCCTCATCTTCAGTTCAATGACTTGATCCTGACAGGCTACCGGCCAATTTCAACCTTTCAGGGGTGCATCAGAAGCTTGTTCTACTTGCACAATGAATTTGGTAACATTTATACCCATGGTAATGTGCTTTACCACACCTTCATGAACCATGAGGGCGGGGAGCCCATCTACGACACACTCCTTTCCCTTGACATGGTCGGAGTCTGCCTGGTCAACACCTTGGGATGCCTGCCCATCATCTATATCACCCTGATGTGCTACCCTGGCACTTGCATCCTGGCCCTCCTGTCCTACAGCCTAATCTCAGCCTGGGGCATCCTCTGTGCCACCACAGCGCGTAGCAACTATGGGCGCCTTCGCGCTTTCATCTGGCAGGCCCTCTTCCGTgtgctcctcttcctgttccgtTGGCTGGGCGACGGTGTAGGCAGCCCAGCTTCGCTGCGCCTCTTCTTCACCATGGACATGCTGGCTATCATGGGTGGCCTGGTGAACCTTAGCCGGGTGCCCGAGCGTTTTAGCCCAGGCCTCTTCGACTACTGGTGCAACAGCCACCAGATAATGCATGTGCTGGTGATCTGCTCCATTATCTACATGCACTGGGGGATGCTGGAGGATTTAGCCTGGATTAAGACGTTCCAGTGTCCGGTGTTGGAGTGAGGGACAGAGA
>XM_036946676.1
CAGTGATTGCTGATTGGTCACACAGAAAGCATGCCACTCTGTGAGCTCAACAGGTCGCTTGCTAAGAACTTCAGTACCTGTTCCAAGGATGAGACTCGTGCCGACATTATCCTGCCAACTATCCTGCTTGACTTGACAATGTATGTGCCTAAAGTTCTTACTGGAGACTCTTTCAGGATATATGTATATTGCACGATCAACTAATGTCCTGTAAACTCAGGGGGACATTGGCTGGAGAAAGCCACCATGGCTTGCTTACATGGACCACGACTACTGAATTTGGAGAAAACCCCTCCTCATCTTCAGTTCAATGACTTGATCCTGACAGGCTACCGGCCAATTTCAACCTTTCAGGGGTGCATCAGAAGCTTGTTCTACTTGCACAATGAATTTGGTAACATTTATACCCATGGATGCCTGCCCATCATCTATATCACCCTGATGTGCTACCCTGGCACTTGCATCCTGGCCCTCCTGTCCTACAGCCTAATCTCAGCCTGGGGCATCCTCTGTGCCACCACAGCGCGTAGCAACTATGGGCGCCTTCGCGCTTTCATCTGGCAGGCCCTCTTCCGTgtgctcctcttcctgttccgtTGGCTGGGCGACGGTGTAGGCAGCCCAGCTTCGCTGCGCCTCTTCTTCACCATGGACATGCTGGCTATCATGGGTGGCCTGGTGAACCTTAGCCGGGTGCCCGAGCGTTTTAGCCCAGGCCTCTTCGACTACTGGTGCAACAGCCACCAGATAATGCATGTGCTGGTGATCTGCTCCATTATCTACATGCACTGGGGGATGCTGGAGGATTTAGCCTGGATTAAGACGTTCCAGTGTCCGGTGTTGGAGTGAGGGACAGAGA

Function

symbol description
paqr4 Predicted to enable signaling receptor activity. Predicted to be integral component of membrane.

NR:

description
PREDICTED: progestin and adipoQ receptor family member 4-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567338.2 False 1078 mRNA 0.53 3 27501331 27504634
XM_036946675.1 False 964 mRNA 0.52 4 27501331 27504634
XM_036946676.1 True 859 mRNA 0.52 2 27501331 27504634

Neighbor

gene id symbol gene type direction distance location
cmn LOC106579069 coding upstream 444 27431151 ~ 27500887 (+)
patl2 patl2 coding upstream 102463 27382279 ~ 27398868 (+)
LOC110491760 tgfi1 coding upstream 119311 27360553 ~ 27382020 (+)
LOC110491761 tceb2 coding upstream 141740 27332830 ~ 27359591 (+)
LOC110492891 NA coding upstream 402111 27098269 ~ 27099220 (+)
LOC110491768 LOC106579066 coding downstream 56507 27561141 ~ 27595350 (+)
sult1st6 LOC106579067 coding downstream 90794 27595428 ~ 27646077 (+)
LOC110491774 LOC106579062 coding downstream 198749 27703383 ~ 27727796 (+)
LOC110491775 LOC106579060 coding downstream 271648 27776282 ~ 27823581 (+)
LOC110491776 LOC106579398 coding downstream 398338 27902972 ~ 27986259 (+)
G1358245 NA non-coding upstream 249159 27251269 ~ 27252172 (+)
G1358223 NA non-coding upstream 303085 27198031 ~ 27198246 (+)
G1358221 NA non-coding upstream 306660 27194464 ~ 27194671 (+)
G1358217 NA non-coding upstream 310613 27190482 ~ 27190718 (+)
G1358342 NA non-coding downstream 4984 27509618 ~ 27510435 (+)
G1358397 NA non-coding downstream 34926 27539560 ~ 27539829 (+)
G1358398 NA non-coding downstream 37065 27541699 ~ 27541936 (+)
G1358437 NA non-coding downstream 95881 27600515 ~ 27601054 (+)
G1358411 NA non-coding downstream 156095 27660729 ~ 27759730 (+)
G1358292 NA other upstream 169056 27329311 ~ 27332275 (+)
mpp3b LOC106579097 other upstream 1186530 26283071 ~ 26314809 (+)
znf281b LOC106578343 other upstream 1411948 26076461 ~ 26107407 (+)
dcakd dcakd other upstream 2717819 24764607 ~ 24783513 (+)
G1355273 NA other upstream 2817412 24681414 ~ 24684055 (+)
G1358698 kif22 other downstream 542048 28046682 ~ 28047390 (+)
G1361207 NA other downstream 2298020 29802654 ~ 29804368 (+)
G1361671 NA other downstream 2438807 29943441 ~ 29943756 (+)

Expression


Co-expression Network