kif22 (kif22)


Basic Information

Item Value
gene id kif22
gene name kif22
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 28013117 ~ 28048865 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565520.2
CCGATTGGCTCAGTTTAGTTACGGCCCCTGTGCTTTATCGTTTGAAAATATTGGGCGGAAGGCCATTTTACGATCGTTTAagtctttcttttttttatcaACAAATTCTGGCATCATTTACTTTAGCAAACATCTTGAACTTTTTTTATACAAACCACATGTTATAGAGAACAGGAGAACTTTCGACATGGCGGCCCAGCGCGTGGCTGAGGACGTTGCGAGAGGAACCAAACAGACAGCCAGGGTTCGGGTTGCGGTGCGCCTACGGCCCTACATGCACATGCAGGACCAGAAGGGCGAGGGGGCCTGCGTAAGAAGACTGGATACGAAGACCCTGGAGATAATCAACTGGAGGAACGCCACAGAGACTCTGCAATACCAGTTTGATGTCTTCCACGGTGAGGAGACAACTCAACAGGAGGTGTTCCTCTCCTCAGTGAAGCCCATTCTGCCCCACCTACTGAAAGGACAGAACGCCAGCGTCTTTGCCTACGGCCCAACAGGAGCTGGGAAGACCCACACTATGCTGGGCAGTCAAGAACAGCCAGGGGTGATCCCACGGGCGGTCCGAGGTGTCTTCAACCTGGTGAAAGCCAAGGAGAGGGAGCACGAAGGCTGGGACTACAGCATCGGCATGTCCTACCTGGAAATATACAACGAGAAGGTGCTGGACCTGTTGTCCCCCAGTGCTCAGGATCTGCCCATCCGAGAGAACAAGGACAGGAACATCTTCATCCCGGGCCTGACCCACAcgcccctctcctccttctccaacTTCCACTCTCATTTCATCCCTGCCAGCCTCAACCGCACCACGGCCTCCACCAAGCTCAACCAGCGCTCCAGCCGCAGCCACGCCATTCTACTCATCAAGGTGGTGCGTACACAGCGCAACCCCCCGCACCGGCAGCAGACAGGCAAGCTCTACCTCGTGGACCTGGCTGGCTCGGAGGACAACCGGCGTACGGGCAACGAGGGCATCCGCCTAAAGGAGAGCGGTGCCATCAACCTCTCCCTCTTCACCCTCAGCAAGGTGGTGGACTCGCTCAACGCGGGTGGCGGCGGGCGTGTGCCCTACCGTGACAGCAAGCTGACGAGGCTTCTGCAGGACTCGCTGGGCGGCTCGTCCCACTCGGTCATGATTACCAACATCGCACCCGAGTACACATACTACTTTGAAACCTTCACAGCACTCAACTTTGCCGCCAAGTCCAAGCAGATCGTCAACAAGCCCTTCGTACGGGAGACGGTGACCGTGCCATCTGTACAAGTGAAGAGGTCCAGGGAGGAGCAGGAGGCTGGGCGGTCCGGTGAGCCCCAGAAAAAGAAGCTAAAAGACGTGAAGAAGACCGGCCAGGAGGATGCTACACCCCCAGCACAGCTACACAGCCCCACAGACCCATCTGTATTGAACCGGCTGATGGCTCTGGAGAAGCTGTTGATGGGCACCCCAGCAAAGGAAAGACTCAACATGCACAGAGAGATCCAGGAGTTGAAAGAGAAGCAAAGGGAGTTTGAGAGCAAAGCCAAAGTGCTCAAAGTGACAGGAAATGGTGCCGCTAGCAACAGCTCGGACAATGGGTCATCGGGAGACTCGCCCCTCTTCAGGACGTATCTACCCCCACTACACAGAAAACAGTCCGCGGCAGCCAAACCCAAAAAACAGCAGGCTGTTGTGTCGCCCCTACAAGTGTCCCAGCTACAACCTCTCCAGCAGTGTCCGGTGGTCAAAAGGCCAACTGTCTGCCTCATGAAGAAACAGAAGAATCTGGAGCAGAGTGAGGTCCAAGAGGGAAAAGAGAATGTGAAGGACACCGGCTGGGAGTCTCATTTGGACAAGTCAGTGCTGGACCAGTCCCGACACAAGATCCTGCAGGTGCTCAACTCCGGGTCCCTCAAAGACCTGAAGGGCCTGCAGCAGATTGGGGACAAGAAGGCCAAGCTCATTCTGGGCTGGAGGGAGATTCAAGGCTCCTTCACCCAGCTGGAGGATCTAACCAATATTGAGGGAATCACAGCCAAAAGACTCTCCTCCTTCATTAAGGCCAACATTCTCAGCATGATGGGGACGTGATTCTGCTATCGGGTCTTTGTCTACTCTTCCTGTCCTTCCAATATTTTGCCTTTTTTATTTTAATGTTTCTATGTTTTTGAAGAATGTTCTCTGATTATTTTCCACTCTCTGACTCTGCATTTAGAACTGTATGACGtcatatgtctgtgtgtatatacaccTCTTATAAGTGGTGGTCTGCAAGCGTGTACTAGTATGACTTTTTATTATATTTCACGAAAATGCGATATCTGTCCTTGTTTTATTTCGAGATGTTTTTGTAGTATTTGCGCTATTCCAGCCGATGGCGCAATATTGCCGTTCAATAAATGTCTCTACTTTTA

Function

symbol description
kif22 Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Acts upstream of or within several processes, including central nervous system development; somitogenesis; and thigmotaxis. Predicted to be located in cytoplasm; cytoskeleton; and nucleus. Predicted to be part of kinesin complex. Predicted to be active in microtubule. Is expressed in brain. Human ortholog(s) of this gene implicated in spondyloepimetaphyseal dysplasia with joint laxity type 2. Orthologous to human KIF22 (kinesin family member 22).

NR:

description
kinesin-like protein KIF22

GO:

id name namespace
GO:0001756 somitogenesis biological_process
GO:0007018 microtubule-based movement biological_process
GO:0048592 eye morphogenesis biological_process
GO:0021952 central nervous system projection neuron axonogenesis biological_process
GO:0007420 brain development biological_process
GO:0006281 DNA repair biological_process
GO:0001966 thigmotaxis biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10403 KIF22; kinesin family member 22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565520.2 True 2397 mRNA 0.53 13 28013117 28048865

Neighbor

gene id symbol gene type direction distance location
prrt2 LOC106579403 coding downstream 141 28002303 ~ 28012976 (-)
adprh LOC106579059 coding downstream 170662 27826183 ~ 27842455 (-)
mto1 mto1 coding downstream 257670 27727803 ~ 27755447 (-)
LOC118939521 NA coding downstream 320879 27690808 ~ 27692238 (-)
ppp1cab LOC107387951 coding downstream 325129 27668847 ~ 27687988 (-)
tlcd3bb LOC106579402 coding upstream 33046 28081911 ~ 28128839 (-)
maz maz coding upstream 116482 28165347 ~ 28176911 (-)
taok2b LOC106579406 coding upstream 131380 28177715 ~ 28237354 (-)
eif3c LOC100286610 coding upstream 249388 28298253 ~ 28369344 (-)
si:ch211-180a12.2 LOC106579407 coding upstream 339914 28388779 ~ 28446671 (-)
G1359406 NA non-coding downstream 512233 27500155 ~ 27500884 (-)
G1359378 NA non-coding downstream 561120 27451209 ~ 27451997 (-)
G1359274 NA non-coding downstream 671862 27339050 ~ 27341255 (-)
G1359276 NA non-coding downstream 676679 27334668 ~ 27336438 (-)
G1359717 pagr1 non-coding upstream 2680 28051545 ~ 28072528 (-)
G1359748 NA non-coding upstream 84532 28133397 ~ 28133627 (-)
G1359771 NA non-coding upstream 128092 28176957 ~ 28177207 (-)
G1359773 NA non-coding upstream 128407 28177272 ~ 28177556 (-)
G1359812 NA non-coding upstream 225901 28274766 ~ 28313407 (-)
G1359412 NA other downstream 484980 27527163 ~ 27528137 (-)
G1359321 NA other downstream 653555 27357284 ~ 27359562 (-)
G1359119 NA other downstream 899716 27111783 ~ 27113401 (-)
LOC110491745 LOC106609103 other downstream 1269662 26729304 ~ 26744821 (-)
G1357833 NA other downstream 1285289 26727295 ~ 26727828 (-)
G1359763 NA other upstream 114598 28163463 ~ 28164227 (-)
G1361290 NA other upstream 1448248 29497113 ~ 29497555 (-)
G1361619 NA other upstream 1875006 29923871 ~ 29925154 (-)
G1363836 NA other upstream 3590572 31639437 ~ 31650697 (-)

Expression


Co-expression Network