LOC110491790 (LOC100194624)


Basic Information

Item Value
gene id LOC110491790
gene name LOC100194624
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 28535317 ~ 28540645 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565553.2
CTTGCCATTCTTTTTTTAGCCGGCGGCTGAAATGTGAGGGGTCACAATAGGAGGATAAAAAGTGTCCCAGGCGGACCAGGAGGTTGTCGCGAACTTTAGTCGgatcttctcccctctcttctcccagcTCTCCTCCAACCCTCCAAGAGTCAAAATGCCTCACTCATTCCCCTTCCTCACTCCTGATCAGAAGAAGGAGCTCAGTGACATCGCTCTCAAGATTGTCGCCAAGGGCAAGGGAATCCTCGCCGCTGACGAGTCTACCGGCAGCGTTGCCAAGCGCTTCCAGAGCATCAATGCTGAGAACACTGAAGAGAACAGGAGGCTGTACCGTCAGCTCCTCTTCACCGCTGACGACCGTGCCGGTCCTTGCATTGGTGGCGTCATCTTCTTCCACGAGACCCTGTACCAGAAGACCGATGCCGGCAAGACCTTCCCCGAGCACGTCAAGTCCAGAGGCTGGGTTGTAGGCATCAAGGTTGACAAAGGTGTTGTCCCCCTTGCTGGAACCAATGGAGAGACCACCACTCAGGGTCTGGATGGCCTGTATGAGCGTTGCGCCCAGTACAAGAAGGACGGTTGTGACTTCGCCAAGTGGCGTTGTGTGCTGAAGATCACCTCCACCACCCCCTCCCGCCTGGCCATCATGGAGAATTGCAATGTCTTGGCTCGTTATGCCAGTATCTGCCAGATGCACGGCATTGTCCCCATTGTTGAGCCCGAGATCCTCCCCGATGGTGACCACGACCTGAAGCGCACCCAGTACGTGACTGAGAAGGTCCTGGCCGCAATGTACAAGGCTCTGTCCGACCACCATGTCTACCTGGAGGGTACCCTCCTGAAGCCCAACATGGTCACTGCCGGACACTCCTGCTCACACAAGTATACCCACCAGGAGATCGCCATGGCCACCGTCACGGCCCTGCGCCGCACCGTGCCCCCAGCAGTTCCTGGCGTCACCTTCCTGTCCGGTGGCCAGTCTGAGGAGGAGGCATCCATCAACCTGAACGTCATGAACCAGTGTCCCCTGCACAGGCCATGGGCATTGACTTTTTCCTATGGCCGTGCCCTCCAGGCATCCGCCCTGAAGGCATGGGGTGGCAAACCTGCGAACGGAAAGGCTGCCCAGGAGGAGTTCATCAAGAGAGCTCTGGCCAACAGCCTGGCCTGCCAAGGCAAGTATGTCGCGTCCGGAGACAGCACCGCCGCTGGAGAATCACTGTTCGTGGCCAACCACGCTTATTAGGCATGGACACTTTACCAGCATCCCTCTCCTAACCCTCACACCATCTCCCTGTACCCGCCACCCTCCCCCACATGGGGAGTGCCATGTCTTATTCGGCACCTCCTAAGAAGCCGTCTCTACTCGACCCTCTGCAACATTACTCGTTTGGTACCTCAgcacggagaaagagagagaaacggaaACCTTTCTTTGGGCTCTTGCTTCAGAGAGAAgattacaaaaaaaatgtgttctgcctccattccctctccctaCCATTTCACACCTTTTTTAAGGTGAAGAGATTCCCATCGTTGTGTTTTTACAAAACATGTAATATTATTCCTGGGTCTGTAACACCTAACTCAGTATAATGTTTGTAATGGAGCCATGGAATAAAGTATGTATCCACAATA

Function

NR:

description
fructose-bisphosphate aldolase A

GO:

id name namespace
GO:0006096 glycolytic process biological_process
GO:0004332 fructose-bisphosphate aldolase activity molecular_function

KEGG:

id description
K01623 ALDO; fructose-bisphosphate aldolase, class I

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565553.2 True 1641 mRNA 0.55 7 28535317 28540645

Neighbor

gene id symbol gene type direction distance location
LOC110491788 LOC106579408 coding downstream 1140 28478779 ~ 28534177 (-)
si:ch211-180a12.2 LOC106579407 coding downstream 88646 28388779 ~ 28446671 (-)
eif3c LOC100286610 coding downstream 165973 28298253 ~ 28369344 (-)
taok2b LOC106579406 coding downstream 297963 28177715 ~ 28237354 (-)
maz maz coding downstream 358406 28165347 ~ 28176911 (-)
afap1l2 afap1l2 coding upstream 85487 28626132 ~ 28767002 (-)
LOC110491794 NA coding upstream 871825 29412470 ~ 29423653 (-)
LOC110491798 LOC106578369 coding upstream 1134172 29674817 ~ 29702593 (-)
LOC110492894 NA coding upstream 1314532 29855177 ~ 29873630 (-)
LOC110492868 LOC106579432 coding upstream 1414961 29955527 ~ 30543872 (-)
G1359890 NA non-coding downstream 34076 28492426 ~ 28501241 (-)
G1359895 NA non-coding downstream 62088 28472188 ~ 28473229 (-)
G1359899 NA non-coding downstream 65535 28469532 ~ 28469782 (-)
G1359812 NA non-coding downstream 221910 28274766 ~ 28313407 (-)
G1359773 NA non-coding downstream 357761 28177272 ~ 28177556 (-)
G1359974 NA non-coding upstream 7635 28548280 ~ 28548519 (-)
G1359976 NA non-coding upstream 9110 28549755 ~ 28549981 (-)
G1359977 NA non-coding upstream 11240 28551885 ~ 28552455 (-)
G1359889 pol3 non-coding upstream 19671 28560316 ~ 28567880 (-)
G1359999 NA non-coding upstream 57721 28598366 ~ 28598608 (-)
G1359763 NA other downstream 371090 28163463 ~ 28164227 (-)
G1359412 NA other downstream 1007180 27527163 ~ 27528137 (-)
G1359321 NA other downstream 1175755 27357284 ~ 27359562 (-)
G1359119 NA other downstream 1421916 27111783 ~ 27113401 (-)
G1361290 NA other upstream 956468 29497113 ~ 29497555 (-)
G1361619 NA other upstream 1383226 29923871 ~ 29925154 (-)
G1363836 NA other upstream 3098792 31639437 ~ 31650697 (-)
G1364105 NA other upstream 3345104 31885749 ~ 31886112 (-)
G1364348 NA other upstream 3478149 32018794 ~ 32019498 (-)

Expression


Co-expression Network