Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110491806 |
| gene name | LOC106579428 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048580.1 |
| NCBI id | CM023234.2 |
| chromosome length | 78541548 |
| location | 30924605 ~ 31019315 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| fibroblast growth factor receptor 2-like isoform X4 |
| id | description |
|---|---|
| K05093 | FGFR2, CD332; fibroblast growth factor receptor 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021565574.2 | False | 4574 | mRNA | 0.48 | 17 | 30924605 | 31019310 |
| XM_021565575.2 | False | 4499 | mRNA | 0.48 | 16 | 30924605 | 31019310 |
| XM_021565569.2 | False | 4845 | mRNA | 0.49 | 18 | 30924605 | 31019311 |
| XM_036946710.1 | False | 4771 | mRNA | 0.48 | 17 | 30924605 | 31019312 |
| XM_021565570.2 | False | 4841 | mRNA | 0.49 | 18 | 30924605 | 31019313 |
| XM_021565571.2 | False | 4841 | mRNA | 0.49 | 18 | 30924605 | 31019313 |
| XM_021565573.2 | True | 4837 | mRNA | 0.49 | 18 | 30924605 | 31019315 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110492868 | LOC106579432 | coding | downstream | 380733 | 29955527 ~ 30543872 (-) |
| LOC110492894 | NA | coding | downstream | 1051023 | 29855177 ~ 29873630 (-) |
| LOC110491798 | LOC106578369 | coding | downstream | 1222012 | 29674817 ~ 29702593 (-) |
| LOC110491794 | NA | coding | downstream | 1500952 | 29412470 ~ 29423653 (-) |
| afap1l2 | afap1l2 | coding | downstream | 2157603 | 28626132 ~ 28767002 (-) |
| LOC110492870 | ate1 | coding | upstream | 110802 | 31130117 ~ 31182991 (-) |
| LOC110491809 | p5cs | coding | upstream | 251294 | 31270609 ~ 31285633 (-) |
| LOC110491810 | LOC106579441 | coding | upstream | 285768 | 31305083 ~ 31307541 (-) |
| LOC110491807 | LOC106576884 | coding | upstream | 294779 | 31314091 ~ 31462245 (-) |
| LOC110491813 | LOC106579422 | coding | upstream | 455476 | 31474791 ~ 31496300 (-) |
| G1362759 | NA | non-coding | downstream | 168827 | 30755478 ~ 30755778 (-) |
| G1362694 | NA | non-coding | downstream | 214278 | 30709871 ~ 30710327 (-) |
| G1362693 | NA | non-coding | downstream | 214932 | 30708963 ~ 30709673 (-) |
| G1362689 | NA | non-coding | downstream | 216919 | 30707448 ~ 30707686 (-) |
| G1362686 | NA | non-coding | downstream | 218069 | 30706337 ~ 30706536 (-) |
| G1363747 | NA | non-coding | upstream | 279017 | 31298332 ~ 31298540 (-) |
| G1363753 | NA | non-coding | upstream | 284454 | 31303769 ~ 31304637 (-) |
| G1363757 | NA | non-coding | upstream | 293929 | 31313244 ~ 31313454 (-) |
| G1363777 | NA | non-coding | upstream | 326660 | 31345975 ~ 31346383 (-) |
| G1361619 | NA | other | downstream | 999451 | 29923871 ~ 29925154 (-) |
| G1361290 | NA | other | downstream | 1427050 | 29497113 ~ 29497555 (-) |
| taok2b | LOC106579406 | other | downstream | 2743665 | 28177715 ~ 28237354 (-) |
| G1359763 | NA | other | downstream | 2760378 | 28163463 ~ 28164227 (-) |
| G1359412 | NA | other | downstream | 3396468 | 27527163 ~ 27528137 (-) |
| G1363836 | NA | other | upstream | 620122 | 31639437 ~ 31650697 (-) |
| G1364105 | NA | other | upstream | 866434 | 31885749 ~ 31886112 (-) |
| G1364348 | NA | other | upstream | 999479 | 32018794 ~ 32019498 (-) |
| G1365099 | NA | other | upstream | 1615150 | 32634465 ~ 32635511 (-) |
| G1366703 | NA | other | upstream | 2664696 | 33684011 ~ 33684473 (-) |
