LOC110492870 (ate1)


Basic Information

Item Value
gene id LOC110492870
gene name ate1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 31130117 ~ 31182991 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945882.1
atggatcgtcgccggaggcttCGGACGGTGGATCgttgccggaggaaccggaccGCGGAGACGCCTACGGACGGTCCAGAGGTGGGCCACAGTTCCTTCCACCAGCAATACTGGCTGGACGGCCGCATTGTGGCAGTTGGGGTGGTGGACATCCTGCCCACTTGTGTGTCCTCCGTCTACCTGTACTACCACCCCGACTTCACCTCTCTATCGCTGGGTTCCTACTCTGCACTCAAGGAGGTCACCTTCACCGGGCATCTCCAGAAAGTGTCCCCCAAGCTGTGCTACTACTACCTGAGCTTCTATATCCACTCCTGCCCCAAGATGCGATACAAGgggcaGTACCAGCCTTCAGACCTCCTGTGCCCAGAGACGTATGTCTTTGTGCCCATAGAGAGCTGCATCCCAAGCCTGGAGCAGACCCACTACGCCCGCTTCAACCAGGAACCTGACGCAGGTAATGAACACAGCTCCCTACTGTACACTAGGAACACTACCCTACAGCAATCAGCACACTGA

Function

symbol description
ate1 Predicted to enable arginyltransferase activity. Predicted to act upstream of or within protein arginylation. Orthologous to human ATE1 (arginyltransferase 1).

NR:

description
arginyl-tRNA--protein transferase 1-like

GO: NA

KEGG:

id description
K00685 ATE1; arginyl-tRNA---protein transferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945882.1 True 519 mRNA 0.58 4 31130117 31182991

Neighbor

gene id symbol gene type direction distance location
LOC110491806 LOC106579428 coding downstream 110802 30924605 ~ 31019315 (-)
LOC110492868 LOC106579432 coding downstream 586245 29955527 ~ 30543872 (-)
LOC110492894 NA coding downstream 1256535 29855177 ~ 29873630 (-)
LOC110491798 LOC106578369 coding downstream 1427524 29674817 ~ 29702593 (-)
LOC110491794 NA coding downstream 1706464 29412470 ~ 29423653 (-)
LOC110491809 p5cs coding upstream 87618 31270609 ~ 31285633 (-)
LOC110491810 LOC106579441 coding upstream 122092 31305083 ~ 31307541 (-)
LOC110491807 LOC106576884 coding upstream 131103 31314091 ~ 31462245 (-)
LOC110491813 LOC106579422 coding upstream 291800 31474791 ~ 31496300 (-)
si:ch211-28p3.4 LOC106579421 coding upstream 529310 31712301 ~ 31728943 (-)
G1363186 NA non-coding downstream 157396 30965578 ~ 30972721 (-)
G1362759 NA non-coding downstream 374339 30755478 ~ 30755778 (-)
G1362694 NA non-coding downstream 419790 30709871 ~ 30710327 (-)
G1362693 NA non-coding downstream 420444 30708963 ~ 30709673 (-)
G1362689 NA non-coding downstream 422431 30707448 ~ 30707686 (-)
G1363747 NA non-coding upstream 115341 31298332 ~ 31298540 (-)
G1363753 NA non-coding upstream 120778 31303769 ~ 31304637 (-)
G1363757 NA non-coding upstream 130253 31313244 ~ 31313454 (-)
G1363777 NA non-coding upstream 162984 31345975 ~ 31346383 (-)
G1361619 NA other downstream 1204963 29923871 ~ 29925154 (-)
G1361290 NA other downstream 1632562 29497113 ~ 29497555 (-)
taok2b LOC106579406 other downstream 2949177 28177715 ~ 28237354 (-)
G1359763 NA other downstream 2965890 28163463 ~ 28164227 (-)
G1359412 NA other downstream 3601980 27527163 ~ 27528137 (-)
G1363836 NA other upstream 456446 31639437 ~ 31650697 (-)
G1364105 NA other upstream 702758 31885749 ~ 31886112 (-)
G1364348 NA other upstream 835803 32018794 ~ 32019498 (-)
G1365099 NA other upstream 1451474 32634465 ~ 32635511 (-)
G1366703 NA other upstream 2501020 33684011 ~ 33684473 (-)

Expression


Co-expression Network