ttc34 (ttc34)


Basic Information

Item Value
gene id ttc34
gene name ttc34
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 31950519 ~ 31958002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565604.2
ATTGGCTTAGACATTTAGCTAGACCTGGCAACCCTGGCTGTGTCTGTTGGTTATAACAGAAGGCGATCGTACGACTTTATGGGCAGAAAGAAAAAAGAACAGAAACAGACAAAGCATGGCTGAACAGACAGATGCTAATCATCTCAAATGCTAGCAGTGAGAAAGAAGCAAGCAGCCCACGCAAATACTTTCCAGATCTCAATGGCAAAATACGCCTTATCTACATCAAAAACAGGGCAATCGGAAATGAGAAACCTTACACATTTGAAAGGACGACGGAGGCGTTCAAATCAATGGATTAAATCTTTGTACAGCAGCTCCTCAACCTCATCTATGCTGGAAATGTGCAGCAGTCTGAGCGTTTGGTTTCCATAGTAACCACGGAAACACGCTGCCACGAACAAAAGGGGGGCGAGCCACGGAGACAAGCCGGGACCTTGGTGAGGCTTTTGGAGTCCACCCTGCCACAGCACGACTGCAGTTCCAGAGGCTCTTCGTGGACCAGGGGACAGGAGCGGCAGCCCGCATGCAACTGCGTcagcaggcagagagaggactgttggggtacagggagacagtcctggTCCGTCTTGACCTGCGTTCCTCTGAGGGCGTGGAGCTGCTGGACCCAGTGATCGCCCAGCTCTGGGCGCTGTGCCACCTGGAGCCCGACGGGGGCAGCAGAGAGTTGCGGGTGCGGCTGGCCGAGTGCCTCCTCCTGCGGGGCGAGTTCCGAGAGGCCCTCTCCATCTGCAGCCAGCTGGCGACCCACACCAACTCCCACGCCCAGCATAGCtaccagaacacactgcaggtgCTGCGCGGCTACTCCCGTCTTCTCTCAGATGACCACAAGGGGGCTCTGGAGGACTTTCAAATGGTGATCGAGCACAAGGCACCCCACCCTTCCAGCTGTGTGCGGGCGCTGTGCGGCAGGGGCGTCCTGCGTATGATGGGGGGCCTGCACTACCTCACAGCCCTGGACTATGTGACGGCGAGCAGGTTGCAGCCCCAGGACACTGCGCTGACTGTACGCTGCTTGGTTCCCTGGAACTGCCGCGGGCTGCTGCTCACCGTGCTGTTGGAGCAGGCCAGGGTCATGCTGGAGGAGTGGACCGTAGATCACAGCTCCAGTCTCAGTCCCTTGGAACAGCAAGAGCACCAGCAGACCAAACAGCTACAGCCTACGCAGACAAAAGATGGCTACAAAGAAGGGACACCAGTTGGAGTCCACTCTCTGGCTGTTTTGCTGATGGAGTTACAGCCCAGTGCTGACGCTCCTCAGATCCTGGTGGCTGATGCCCTGTACCTGCTGGGCCGGGTGGAGGAAGCGTATCGCTTGCTGTTGGCCATTGGGCCCACTAGCCCACGTGCACCCATCCTGGCCCGCCTCACCCTGCTACAACTGCACCGGGGCTTCCTTTATGATGCCAACCAGCTGCTGAAGAAGTTGATCCAGTGTGGTGATACGAGCTGCTTGCGCCCCCTGCTGGCCGTGGCGTCTAAAAAGGACCGGCTGCTGCTGCAGGGCTACTGCCACTCTGCCTCCAAACGCATCCTGGAGGGCCTGCAAGGCGAGTGCACCCTGAGGCAGGCCGTGGCCTATCTGTCCATCGCCATCATGGCCTCTGGATGTGAGGCAGCAAACTCATTGATGGAAAGGGCCAGGTGCTATGTCTTGTTGGGCCAACGCAAGACAGCCGTCTTTGATTTCAGCTCCATCTTGAAAGAGCACCCTGACCATGTACAGGCCCTCTGTGGAAGAGGCTTCACCTATCTCATGCTAAACCAACAGAAGGAATGCACTCAGGATATACTGGCAGCACTTCAAATAAGCATGGACGCCGTCACCAAAGACATCCTATCGCTCAAAGATAAGGCAAGGAAACTGGTCTGTGATTGGCTGCAGCAGTACTGCCGGACCAATCTGTCTGAGATCCTGGCGGCTAAGGCCGTCCCCTGCCAGGAAGAAGAGCTTCGAGAGGCCTTTCTAATTGGAGGAGTCCTGATGAGGACTGACTGCCGAGACACCAGATGTCATCTCCTCTACGTAGATATACTACTGGCCAAAGGTGAGGTGAAATCAGCAGGAGCTCACCTGGCTCAGGTGTTTGGCCAGGATCCCCGGGAGGCTGCAGCTCAGGCCAGGGTGGGCGTGGTGGAGGCCTGGCAGCAGAATTACCGCGGAGGCGGCGCCAGGCTGAGCAAGCTGACCGAAAAGGAACCCTCTACTCTGGACTTCCTGCTGACCCTCATTCCCCCGATTCACAGGAAACACATGGCACAAGCAGCAGCCCAGGAAGCAGGCAGTGTCTCAGCGAGTGGCCATTGGGAGCAAGCCCTGGCCCTTCTGACCGTGGCTGTGCGAGCCGCGGCAGAGCTTCGACTGCAGTTCCTGCGCCAACGGGCCGCTTGCCTCGCCCAGCTCGACCTGCATGAACGGGCTGTGGCCGACCTGGACCGGGTCATCTGGAGCCACGATGACCCCTCCGACGCTACAGTCTCCGGAGCCCCAGAAGAGCCTCACGTCTGGGCAGACGACCTGTGTCAGCGAGGCCGCAGCCTGGTGCTGTGCTCCCACGAGGGGCCCGCCCTGGACGACTTCAGCCGGGCCCTGGAGCTCCACCGGGGCCAGGCTTTGCTGTGTGTGGAGGCCGGGCTGGGAAGGTCCCGCCTGGCCGAGTGCTTCCTGCGTATGGCCCTGCAGCACTACGGAGAGCAGCAGCTCAGTAAGGCCTGGAGGTTGACCGAGAGCGGCCTGTTGGTGGACAGTGAGCACATGGAGCTGCGCAGGCTCAGGGCCAGGGTCAAGCGGGAGCACTGCAGCCCCTGCATTGTACACTAGATTAGTGTACCTTTGTAGTGCCTTGAGATACCATTGTACTGTACTTTGGAAGAAACCCTTCCAAGTAAAGCTCACTTAAAGTAACCCTATGACAATTTGTTTTTATGTACACTAAACCTCAGTTAATTGCTACCGCGAAAATATTTAGAATGTCAAAGGGGAAGCTGCATTTATATCTTATTCAGAATGAGGGCTAATAGAATAATGAGCATTTCCCTTGGGTAGTGTTTTTGTAAACATGGAAAAGTCATAGAATTTATTTGTAATATGTGAGTATTTTGCAAtcacattcctgacatttaataggAAATGGCGTGGGAACAATGGATATTCCCTGGGGCTTCAATTCAATATACTTGATACCTGGTTGATATGGTGCCTTGTGGTGGTTGAAAGAATCCCAAAGGAACAAACAAGTAACACAGGTTATTTCTGTGTAATTACGTTTGACTATTTTACTACATAACTAGTAAGACTGTAAAGATGCAACTACACACAACaacttttgttttatttttgtgtATTTTTGAATTCATGTGTAATAAACCAAATGTCTTCGACAGCAAttacttttttttacattcaa
>XM_021565603.2
CATTGGCTTAGACATTTAGCTAGACCTGGCAACCCTGGCTGTGTCTGTTGGTTATAACAGAAGGCGATCGTACGACTTTATGGGCAGAAAGAAAAAAGAACAGAAACAGACAAAGCATGGCTGAACAGACAGATGCTAATCATCTCAAATGCTAGCAGTGAGAAAGAAGCAAGCAGCCCACGCAAATACTTTCCAGATCTCAATGGCAAAATACGCCTTATCTACATCAAAAACAGGGCAATCGGAAATGAGAAACCTTACACATTTGAAAGGACGACGGAGGCGTTCAAATCAATGGATTAAATCTTTGTACAGCAGCTCCTCAACCTCATCTATGCTGGAAATGTGCAGCAGTCTGAGCGTTTGGTTTCCATAGTAACCACGGAAACACGCTGCCACGAACAAAAGGTAGTACTGGCTCGCGCGTTTATTACAGACATAATCATCCTAATATTAGCCTGTATTAGCATGCACTATGCTTAGAAGTGCATTTGTAAGACTTTCTCAAAACTAGTGACAGTAGTTTACTTGATACCAGTAGTTGGCTGCGCTGTATTGAATTACAAATATGGGGCCAGTGCACAGCAATGTGTATTGTGTTCTTGAGAGTCTCTTGCCTATTGAATTTTAATAGCCAACAAATTGGTTAGCTAACACACTGAGGAAATGTAGGTCAAACTATATATCAGTTACTATAAAGAATAGCTAGCTAATGCTAGAGTTCCTTTTTTGGTATATAACTTTAGTAGCTTGCAGAGACAGCAGCTATAAGTTATCTAGCAACAAGTAACAAATAAACAAAGTGAACTGGCTGAAAACCTAGGAGGACAGTGGGGGTTGTAACAAACATAGGGGACTGAGCAAGCTTGCCTAGGCACACATTTTTCTCTGTGGAAAATGTACCTTATTCATAAAACAGAAAGTTGAGCTCACAAAATGATTAAAGGTAAAGGAAagccaaatgtatatttctcagTACGCTGCTCAGCTTTGCTCGAAGGAAAGCAAAACCCATGTCGAGAGGGTTCCACTTGTGTGGTTTTGGAGTTAACTAGAGCCCTCACCTGCTTGCTCTCAGACCCCTACAGTCCCAAAGGCCCTAGGCTTTATCTCAAGGCTTTCCAAGACAATAAATCGGAGACTGTAAGACTAGTCAAGGGTAGACAAGCTCAGCACCTGCCCAAGATAGTGAAGGTCTTCTCTGAGCACATTTTGCCAAAAAATACTGAAATGAAGTCtagggagagagcgagtgaggtCATCGACATTGTAGCAGAAGCTGCCTCTGAATTCCTTGAGTTCTTAATGGCTGTTTCGCCAGGGGACACAGATGTGCAAGAGCTGCAAGCAGCCTTCTTATTTTCATTAGGCAAGTTCGAAGAGAGCGCAGATGTTTATTCTGTTGCCTTGCAGGATCATTCACAATCACAACCAAAGTCAGGTACAGGCAAGGTGGTTAAGGGGATGCCAGCAGAAAGAAGAGCCAGTCTCTTGACCAGTAGAGCGGCCACCCATTTCTCCACAGGGGGGCGAGCCACGGAGACAAGCCGGGACCTTGGTGAGGCTTTTGGAGTCCACCCTGCCACAGCACGACTGCAGTTCCAGAGGCTCTTCGTGGACCAGGGGACAGGAGCGGCAGCCCGCATGCAACTGCGTcagcaggcagagagaggactgttggggtacagggagacagtcctggTCCGTCTTGACCTGCGTTCCTCTGAGGGCGTGGAGCTGCTGGACCCAGTGATCGCCCAGCTCTGGGCGCTGTGCCACCTGGAGCCCGACGGGGGCAGCAGAGAGTTGCGGGTGCGGCTGGCCGAGTGCCTCCTCCTGCGGGGCGAGTTCCGAGAGGCCCTCTCCATCTGCAGCCAGCTGGCGACCCACACCAACTCCCACGCCCAGCATAGCtaccagaacacactgcaggtgCTGCGCGGCTACTCCCGTCTTCTCTCAGATGACCACAAGGGGGCTCTGGAGGACTTTCAAATGGTGATCGAGCACAAGGCACCCCACCCTTCCAGCTGTGTGCGGGCGCTGTGCGGCAGGGGCGTCCTGCGTATGATGGGGGGCCTGCACTACCTCACAGCCCTGGACTATGTGACGGCGAGCAGGTTGCAGCCCCAGGACACTGCGCTGACTGTACGCTGCTTGGTTCCCTGGAACTGCCGCGGGCTGCTGCTCACCGTGCTGTTGGAGCAGGCCAGGGTCATGCTGGAGGAGTGGACCGTAGATCACAGCTCCAGTCTCAGTCCCTTGGAACAGCAAGAGCACCAGCAGACCAAACAGCTACAGCCTACGCAGACAAAAGATGGCTACAAAGAAGGGACACCAGTTGGAGTCCACTCTCTGGCTGTTTTGCTGATGGAGTTACAGCCCAGTGCTGACGCTCCTCAGATCCTGGTGGCTGATGCCCTGTACCTGCTGGGCCGGGTGGAGGAAGCGTATCGCTTGCTGTTGGCCATTGGGCCCACTAGCCCACGTGCACCCATCCTGGCCCGCCTCACCCTGCTACAACTGCACCGGGGCTTCCTTTATGATGCCAACCAGCTGCTGAAGAAGTTGATCCAGTGTGGTGATACGAGCTGCTTGCGCCCCCTGCTGGCCGTGGCGTCTAAAAAGGACCGGCTGCTGCTGCAGGGCTACTGCCACTCTGCCTCCAAACGCATCCTGGAGGGCCTGCAAGGCGAGTGCACCCTGAGGCAGGCCGTGGCCTATCTGTCCATCGCCATCATGGCCTCTGGATGTGAGGCAGCAAACTCATTGATGGAAAGGGCCAGGTGCTATGTCTTGTTGGGCCAACGCAAGACAGCCGTCTTTGATTTCAGCTCCATCTTGAAAGAGCACCCTGACCATGTACAGGCCCTCTGTGGAAGAGGCTTCACCTATCTCATGCTAAACCAACAGAAGGAATGCACTCAGGATATACTGGCAGCACTTCAAATAAGCATGGACGCCGTCACCAAAGACATCCTATCGCTCAAAGATAAGGCAAGGAAACTGGTCTGTGATTGGCTGCAGCAGTACTGCCGGACCAATCTGTCTGAGATCCTGGCGGCTAAGGCCGTCCCCTGCCAGGAAGAAGAGCTTCGAGAGGCCTTTCTAATTGGAGGAGTCCTGATGAGGACTGACTGCCGAGACACCAGATGTCATCTCCTCTACGTAGATATACTACTGGCCAAAGGTGAGGTGAAATCAGCAGGAGCTCACCTGGCTCAGGTGTTTGGCCAGGATCCCCGGGAGGCTGCAGCTCAGGCCAGGGTGGGCGTGGTGGAGGCCTGGCAGCAGAATTACCGCGGAGGCGGCGCCAGGCTGAGCAAGCTGACCGAAAAGGAACCCTCTACTCTGGACTTCCTGCTGACCCTCATTCCCCCGATTCACAGGAAACACATGGCACAAGCAGCAGCCCAGGAAGCAGGCAGTGTCTCAGCGAGTGGCCATTGGGAGCAAGCCCTGGCCCTTCTGACCGTGGCTGTGCGAGCCGCGGCAGAGCTTCGACTGCAGTTCCTGCGCCAACGGGCCGCTTGCCTCGCCCAGCTCGACCTGCATGAACGGGCTGTGGCCGACCTGGACCGGGTCATCTGGAGCCACGATGACCCCTCCGACGCTACAGTCTCCGGAGCCCCAGAAGAGCCTCACGTCTGGGCAGACGACCTGTGTCAGCGAGGCCGCAGCCTGGTGCTGTGCTCCCACGAGGGGCCCGCCCTGGACGACTTCAGCCGGGCCCTGGAGCTCCACCGGGGCCAGGCTTTGCTGTGTGTGGAGGCCGGGCTGGGAAGGTCCCGCCTGGCCGAGTGCTTCCTGCGTATGGCCCTGCAGCACTACGGAGAGCAGCAGCTCAGTAAGGCCTGGAGGTTGACCGAGAGCGGCCTGTTGGTGGACAGTGAGCACATGGAGCTGCGCAGGCTCAGGGCCAGGGTCAAGCGGGAGCACTGCAGCCCCTGCATTGTACACTAGATTAGTGTACCTTTGTAGTGCCTTGAGATACCATTGTACTGTACTTTGGAAGAAACCCTTCCAAGTAAAGCTCACTTAAAGTAACCCTATGACAATTTGTTTTTATGTACACTAAACCTCAGTTAATTGCTACCGCGAAAATATTTAGAATGTCAAAGGGGAAGCTGCATTTATATCTTATTCAGAATGAGGGCTAATAGAATAATGAGCATTTCCCTTGGGTAGTGTTTTTGTAAACATGGAAAAGTCATAGAATTTATTTGTAATATGTGAGTATTTTGCAAtcacattcctgacatttaataggAAATGGCGTGGGAACAATGGATATTCCCTGGGGCTTCAATTCAATATACTTGATACCTGGTTGATATGGTGCCTTGTGGTGGTTGAAAGAATCCCAAAGGAACAAACAAGTAACACAGGTTATTTCTGTGTAATTACGTTTGACTATTTTACTACATAACTAGTAAGACTGTAAAGATGCAACTACACACAACaacttttgttttatttttgtgtATTTTTGAATTCATGTGTAATAAACCAAATGTCTTCGACAGCAAttacttttttttacattcaa

Function

symbol description
ttc34 Orthologous to human TTC34 (tetratricopeptide repeat domain 34).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K24947 TTC34; tetratricopeptide repeat protein 34

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565604.2 False 3431 mRNA 0.55 8 31950519 31958001
XM_021565603.2 True 4549 mRNA 0.52 7 31950519 31958002

Neighbor

gene id symbol gene type direction distance location
si:ch211-28p3.4 LOC106579421 coding downstream 221576 31712301 ~ 31728943 (-)
LOC110491813 LOC106579422 coding downstream 454219 31474791 ~ 31496300 (-)
LOC110491807 LOC106576884 coding downstream 488274 31314091 ~ 31462245 (-)
LOC110491810 LOC106579441 coding downstream 642978 31305083 ~ 31307541 (-)
LOC110491809 p5cs coding downstream 664886 31270609 ~ 31285633 (-)
LOC110491820 LOC106567387 coding upstream 8720 31966722 ~ 31989796 (-)
LOC110491822 LOC106567384 coding upstream 98946 32056948 ~ 32096133 (-)
LOC110491823 NA coding upstream 123705 32081707 ~ 32086786 (-)
LOC110491825 LOC100380856 coding upstream 272285 32230287 ~ 32350853 (-)
pigt LOC106567380 coding upstream 478225 32436227 ~ 32466311 (-)
G1364313 NA non-coding downstream 3963 31946321 ~ 31946556 (-)
G1364124 NA non-coding downstream 28136 31920896 ~ 31922383 (-)
G1364123 NA non-coding downstream 31159 31913091 ~ 31919360 (-)
G1364117 NA non-coding downstream 43029 31901494 ~ 31907490 (-)
G1364118 NA non-coding downstream 47209 31899840 ~ 31903310 (-)
G1364347 LOC106581475 non-coding upstream 59411 32017413 ~ 32017647 (-)
G1364357 NA non-coding upstream 73892 32031894 ~ 32032230 (-)
G1364358 NA non-coding upstream 74349 32032351 ~ 32032690 (-)
G1364366 NA non-coding upstream 86589 32044591 ~ 32045093 (-)
G1364341 NA non-coding upstream 96607 32054609 ~ 32056554 (-)
G1364105 NA other downstream 64407 31885749 ~ 31886112 (-)
G1363836 NA other downstream 299822 31639437 ~ 31650697 (-)
G1361619 NA other downstream 2025365 29923871 ~ 29925154 (-)
G1361290 NA other downstream 2452964 29497113 ~ 29497555 (-)
taok2b LOC106579406 other downstream 3769579 28177715 ~ 28237354 (-)
G1364348 NA other upstream 60792 32018794 ~ 32019498 (-)
G1365099 NA other upstream 676463 32634465 ~ 32635511 (-)
G1366703 NA other upstream 1726009 33684011 ~ 33684473 (-)
G1366756 NA other upstream 1789398 33747400 ~ 33751407 (-)
LOC110491043 NA other upstream 1905504 33863087 ~ 33870055 (-)

Expression


Co-expression Network