LOC110491041 (LOC106572132)


Basic Information

Item Value
gene id LOC110491041
gene name LOC106572132
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 33419422 ~ 33483836 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036945770.1
agagagttagATAGAGGAAATGCTGCCTGAAATAACAAAGAAAATTACTTACTATACTTAAACCCAGAGAGTCAACTGGTGCGGTCATCATACCTCCTTTGGGATACTATCAACAGCTTGGTACAAGTTCTACTATTCTATCTACAAATCTTCTAACTTCCAAGCTTAGTTATCTGTAGATACTTATCTCACACTTTCAGTGCTGTTAAGACCATGGCATCCCTAGGATGGGTCGTGGTGGTTCTAGTGGGCTTTTGGAGCCAGCTAAGCCCAGGTCAGGGAGCTAATAACGGGCCTGGCAGATACCGCTACCAGCGCAGGAACTGCTACACCTGCTTCTATGGATACAATGGCTACAACACGGGGCACATGAAAGGTGCAGATGTTGACGAGTGTCAAGTCCACAATGGAGGCTGCCACCACCGATGCGTCAACACCAGAAGCTCGTTCTACTGCGAATGCAACCCAGGCACCCGCCTGCACACAGATGGCCGGACATGCATTGCCGTCCACTCCTGTGCTGTCAGAAATGGAGGCTGTGAGCAGGACTGTGTGCAGCTGTCCCCGGATCACTACCAGTGTCGCTGCAGACCCAACTATCATCTTGCAGAGGACAGCAAACACTGCAAGTTGAGAAACCCGTGTGCAGACAGAAATGGAGGCTGTGTGCACACCTGTAGAAATGAAGGAGGACGATCTCAGTGTGACTGTCGTCCTGGATATACACTGGCACAGGATGGCAAAAACTGTGAAGacatCGATGAGTGTGAGACAGGCCAAACTGCCTGTGCCCACGGTTGCCATAACACCCAGGGTTCCTTTACCTGTGTCTGTAACCCAGCATACAAGTTGGGTGCCAATGGCAGGAAATGCTATCGTATCGAGATGGAGATTGTGAACGGTTGTGAGACTGCCAACGGAGGCTGTTCCCAAAAGTGCCAACACTCCGCCCTCGGACCTGTCTGCAGCTGTAACCATGGTTACCATCTGGACGATGACCTCAAGACATGTGTGGACTTGGACGAGTGCGAGACGGGAAGCTCGTGTTGCGAGCAGGACTGTACGAACTATCCCGGGGGTTACGAATGCTACTGCGGGGCTGGCTACCGTCTCAACTCGGATGGGTGTGGCTGTGATGATGTGGATGAGTGTCTGGTAGACAACGGAGGCTGTGACCATACCTGCCAGAACACAGCCGGCTCCTTCCAGTGCTACTGTCGCCTCGGACACCGGCTAAACGAGAACCGTCTCTCCTGTATTCCCCTGGAGCGGGCAGTAGAGCTGTTGGAGTGGAGCGGCCGCATCGCGGTGAAGCTCCCTCCACCCCAGTTCACCCTGCTGAATGACAACTTCCAGCCGCTGGAGCGCTATGACGACTATGAGGAGGACGGCCTGGGAGAGCTCCGGGCCCAGAGCACTCTCACCAAGACCTTTGTGTGTCTAAACGAAACGTTTGGCCATGACTGCAGCCTGACGTGTGACGACTGCTCCAACGGTGGTGTGTGTGACCTGGAGGAGGGACGTTGTGACTGTCCTGATGGGTGGACAGGCCTTGTCTGCAACCAGACTTGTCTAGAGGGCACATTTGGCAGGAACTGCCTCTTCAGCTGTAAGTGTAAGAATGGTGCCACCTGTGACCCTGTGAGCGGGCACTGTCGCTGCCCACCTGGAGTCAGTGGGGATCTGTGCCAGGATGGCTGTCCTAGCGGCCTGTATGGGAAACTTTGCAATAAGAAGTGTAACTGTGCCAAAAACGGGCACTGCCATCGGACCTACGGAGCCTGCCTGTGTGACCCTGGGCTCTATGGGCGTTTCTGTCACCTACCGTGTCCTAAGTGGGCATACGGCCCTGGCTGCTCGGAGGAGTGCCAGTGTTTCCAACAGAACACCCTGGAGTGCCACCGCCGCCATGGCTCCTGTGTCTGCAAACCAGGCTACCAGGGCAAGAACTGCCAGGAGGAATGTGACAGAGGATACTATGGCCTTGCCTGCAAGAGGACATGTGGGTGTCCATCAGGGGTACCCTGTGATCGTGTGACAGGGGAATGTCTGCGCCAGTGCCCACCTGGTTTCCATGGGGACAACTGTGACCTAGACTGCCTGAAGGGGCGCTACGGGGCTGGATGTAACCAATCGTGCCACTGCTCTGGCGCTCCATGTGACAAGGTGACAGGACGATGCCACTGTCTTGACGGTGTGACTGGACAGCACTGTGAGACTGaGTGTGAGGAGGGTCGATGGGGTGTGGGCTGCTCAGGCTCCTGTCCTGACTGTCAGAACGGGGGAGTGTGTGACAAACACAATGGAACGTGCCGTTGCCAACCTGGATACATGGGCACCCTTTGTCAGAGTGtCTGCCCGTTGGGTAGATTTGGCCTGGGTTGCCAGCTACGCTGTCGGTGCGATAACGGTGGGCGCTGCCACCCGTTGACGGGCCGCTGTGCCTGTCCTGAAGGATGGACTGGACCCAGCTGCAGTAGAGTGTGTGACGCCGGGCGCTGGGGGGTGGACTGTGCCAACGTGTGTGAGTGCCCGGACAACGATGGCAGCTGCGACCTCATCACGGGACAGTGTCGCTGTGAGGCGGGCTACACAGGACCACGCTGCCAACAGAgtacaaacatacagggctga

Function

NR:

description
multiple epidermal growth factor-like domains protein 6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036945770.1 True 2634 mRNA 0.56 19 33419422 33483836

Neighbor

gene id symbol gene type direction distance location
LOC118939522 LOC106572132 coding downstream 2927 33371376 ~ 33416495 (-)
LOC110491838 LOC106567371 coding downstream 223946 33193536 ~ 33195476 (-)
LOC110491834 NA coding downstream 449152 32968844 ~ 32970270 (-)
LOC110491831 LOC106567377 coding downstream 683976 32636546 ~ 32735446 (-)
LOC110491830 LOC106567378 coding downstream 790442 32618748 ~ 32628980 (-)
LOC118939523 NA coding upstream 284 33484120 ~ 33531347 (-)
clcn6 clcn6 coding upstream 168821 33652657 ~ 33681243 (-)
LOC110491843 LOC106567362 coding upstream 288489 33772325 ~ 33862653 (-)
LOC110491043 NA coding upstream 379251 33863087 ~ 33870055 (-)
skia ski coding upstream 864093 34347929 ~ 34429211 (-)
G1366187 NA non-coding downstream 51262 33367592 ~ 33368160 (-)
G1366040 LOC100136213 non-coding downstream 65915 33351536 ~ 33353507 (-)
G1365921 NA non-coding downstream 145272 33273725 ~ 33274150 (-)
G1365910 NA non-coding downstream 153192 33266015 ~ 33266230 (-)
G1365700 LOC106572137 non-coding downstream 413114 33005663 ~ 33006308 (-)
G1366252 NA non-coding upstream 21320 33505156 ~ 33505388 (-)
G1366253 NA non-coding upstream 21623 33505459 ~ 33505662 (-)
G1366265 NA non-coding upstream 35618 33519454 ~ 33519668 (-)
G1366267 NA non-coding upstream 37733 33521569 ~ 33521836 (-)
G1366279 NA non-coding upstream 54812 33538648 ~ 33538879 (-)
G1365099 NA other downstream 783911 32634465 ~ 32635511 (-)
G1364348 NA other downstream 1399924 32018794 ~ 32019498 (-)
G1364105 NA other downstream 1533310 31885749 ~ 31886112 (-)
G1363836 NA other downstream 1768725 31639437 ~ 31650697 (-)
G1361619 NA other downstream 3494268 29923871 ~ 29925154 (-)
G1366703 NA other upstream 200175 33684011 ~ 33684473 (-)
G1366756 NA other upstream 263564 33747400 ~ 33751407 (-)
LOC110491862 tnfrsf6b other upstream 1594265 35077807 ~ 35079706 (-)
G1369101 NA other upstream 2264140 35747976 ~ 35780436 (-)

Expression


Co-expression Network