vnp (vnp)


Basic Information

Item Value
gene id vnp
gene name vnp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048580.1
NCBI id CM023234.2
chromosome length 78541548
location 33632256 ~ 33633908 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>NM_001124212.2
TAAAACACTGAAAGGGATATCTGAGACGCCTCAAAAAGACAGTGGGGGGTTCGTTATTGGAATGGCGAAATTGCATATTTTCCTTGGATATATCGTATTAATAACGACACTGAGTGTGAGCTGTGGAACTCCATATGCCAGTCGGAATGTTCAAGAGTTGGAAAATCTGAAGGATCTGATCCAGCGGCTCGAGGACAAGTTGACCGTTAACGAGGAAAATTACGCTTATCCATCCGAGTCTGAGGATGTGGACACAGCTGAGATGGAGGACATTGAGTACTCGCCCACGGCAATCCGGGGGCAGGAAGAGAGAATGACCATGAACGCACCCAACAGAATTGCCCCTGAAAGCCCTGTGGTGTCACGCCTGAAAGATCTCATCGGTTTGACAAAAACGGCCAAATCGTTCAACAGCTGTTTCGGTAATCGGATTGAGAGAATCGGCTCGTGGAGCGGACTGGGGTGCAATAATGTCAAGACTGGTAACAAGAAGAGAATATTTGGGAACTGAAGAATAATGGAGGCTACCCATTCATGGACATCACGAAACTGCGTCATGTCTGACCTCTGTGGAAATCTCCATCCTATTATGGAGAATTCATTTTTTTCTGTCaaataatatatttatttgaTAAACTAACGTATATTAAATCATTTTGATATTAAAACATACAAAATTAAATATCTTAATTTCAGTGTTGGCTTGGTCAGTGAGAATTAGACATATGCACATTTGATTTCTACTATGAAAAAGGAATATATGATTGCTAATTGCACTCCAGAAATAGCCGATATAATGCATTTGTTATGTTGGACGCCTGTACAGTTTTGTTCACTTGTGTGTATAAAATCAATGTATATGTTTGATGATGTTTGGACATGGTATTATTTATAATAAACTA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
NM_001124212.2 True 902 mRNA 0.40 3 33632256 33633908

Neighbor

gene id symbol gene type direction distance location
nppal LOC106567368 coding upstream 4467 33626677 ~ 33627789 (+)
LOC110491840 LOC106567458 coding upstream 33392 33579839 ~ 33598864 (+)
kiaa2013 LOC106567369 coding upstream 71482 33545397 ~ 33560774 (+)
foxl2l LOC100136213 coding upstream 279770 33351596 ~ 33352486 (+)
LOC110491836 LOC106567372 coding upstream 593862 33014941 ~ 33038394 (+)
nppb nppb coding downstream 1653 33635561 ~ 33636574 (+)
anp anp coding downstream 5696 33639604 ~ 33641206 (+)
LOC110491842 mthfr coding downstream 87357 33721265 ~ 33747883 (+)
LOC110491844 LOC106567364 coding downstream 171623 33805531 ~ 33833968 (+)
plch2a LOC106572832 coding downstream 232770 33866678 ~ 34050946 (+)
G1366378 NA non-coding upstream 8283 33623763 ~ 33623973 (+)
G1366315 NA non-coding upstream 55365 33576689 ~ 33576891 (+)
G1366309 NA non-coding upstream 58842 33573162 ~ 33573414 (+)
G1366308 NA non-coding upstream 59189 33572742 ~ 33573067 (+)
G1366302 NA non-coding upstream 61855 33570028 ~ 33570401 (+)
G1366387 NA non-coding downstream 4253 33638161 ~ 33638617 (+)
G1366424 NA non-coding downstream 52828 33686736 ~ 33687157 (+)
G1366426 NA non-coding downstream 55306 33689214 ~ 33689463 (+)
G1366428 LOC106569561 non-coding downstream 58861 33692769 ~ 33701675 (+)
G1366429 NA non-coding downstream 59408 33693316 ~ 33702028 (+)
G1364937 LOC106613263 other upstream 962125 32669696 ~ 32670131 (+)
G1364907 NA other upstream 1025123 32606790 ~ 32607133 (+)
G1364768 NA other upstream 1230448 32401434 ~ 32401808 (+)
G1363401 NA other upstream 2396870 31234493 ~ 31235386 (+)
G1362902 fgfr2 other upstream 2676281 30954609 ~ 30955975 (+)
G1366438 NA other downstream 79325 33713233 ~ 33713620 (+)
LOC110491848 morn1 other downstream 483573 34073929 ~ 34154670 (+)
si:ch73-70k4.1 faap20 other downstream 800477 34434347 ~ 34441463 (+)
G1368422 NA other downstream 2108842 35706331 ~ 35779587 (+)
G1368473 yo84 other downstream 2198383 35832291 ~ 35832708 (+)

Expression


Co-expression Network